Transcript Information: R_Transcript_157359.p1


Annotated TAIR IDAT3G47530.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17517382-17519157 | Reverse length=591
E-Value6.7E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5774163788029
Replicate 21.0044526433723
Replicate 31.3432963405151
Condition 2: 8 Hour
Replicate 11.3603258304025
Replicate 20.96621094375493
Replicate 31.5966694527192
Condition 3: 24 Hour
Replicate 12.0902941765965
Replicate 21.3954716273359
Replicate 32.0941939669562


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157359.p1 GENE.R_Transcript_157359~~R_Transcript_157359.p1 ORF type:5prime_partial len:648 (+),score=104.24,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5.1e-09,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|65,DYW_deaminase|PF14432.2|2.2e+03,DYW_deaminase|PF14432.2|5.2e-35,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.0077,PPR|PF01535.16|0.0025,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|7.1e-05,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|0.056,PPR|PF01535.16|1.1,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.17,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|8.3e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|65,PPR_1|PF12854.3|92,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.082,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.18 R_Transcript_157359:3-1946(+)
CAGACCAAGCTCCATTCCTGTGAGTCTATGACACCGAGGTGGTATTTACGCCATTCTTCTTCCTTTCCCTTCACCAATCCCTTCTTCTTCTACCACTACTACTACCTTTACAATCGTTGCTTCACCTCAGTTTCTCTTCTTCTCTTACAAGACAACCCTCCACACATCTCTTCAAACTTCCAAAACTCTTTATACCCCAACCCCACATCACAATACCAAAAGAGAGAACACCTTTTTTCTCTTCTGAAATCATGTTCTTCAAAACCCCATTTTCTTCAACTTCATGCCCAGTTCATCCGTTCCAATTTGATCCAGCACCCTCGTTTATCGCTCAAGTTCCTCACAAAAGCTGCAACTTTCCCCCCTCAAAATATGACTTATCTCTCTAAGATTTTCTCTCAGTTAATGGCACCTAATGTTCCTCATTATAATATAATAATAATGGCTAGTGATTGCGCTTCTTATGGGCTTAAGTTTTTCAACAGGATGAGACAAGATGGGTTCTTTCCTGACCCATTAACCTTGTCCTTTTGTTTAAAGTCTTTTGTTAAGATTTCTGGGTTGCTTGAGGGAAAACAGCTTCATGTTAGGATTTTGGTTGGTGGGTACACAAAAGATCCCATCTTGATGAATTCTTTGATGAATTTGTACTCTGTTTGTGGCAAATGTGGGGATGCATATAAGGTGTTTGATGAATTGCCTCAAAGAGATACTGTTGATTGTAATGCAATGATCTCTTGTCTTATGCAGAATAAGAGAACTAGAGATGCTTTGACTGTATTTGATACTATGGAAAGCAGCTTTGGGACACATTGTAGGCCTGATGATGTTACTTGCTTGTTGTTGATTCAGGTTTGTGGTGATTTGGGTGCTTTAGATTTTGGTAGGAAGGTTAGAGATTATGTTGAGGAACATGGGTATGGGAAGTTTTTGAAGATTAATAATGCTCTCATTACCATGTATTCGAAATGTGGGTATGTGGATGAAGCATATGAAATCTTCAAGAGGATTGAGAATAAGAACTTGGTGTCTTGGAGTGCAATGCTATCAGGTTTTGCAATGAATGGGTATGGACATGATGCCATTGAAATGTTTTGGGAGATGCAGAGGATGGGGTTTAGCCCAGACGATAAGGCTTTTACCGGGGTTTTGTATGCCTGCAGTCATAGTGGCTTGCTCGAGGAGGGGTTGGCGTTTTTTGATATGATGATAAAGGAGTTCAGAGTAAAACCAAATTCCTATCATTATGGGTGTGTGGTTGATATACTAGGACGGGCTGGTTTACTTAGTCGAGCATATGATCTCATAATGTCCATGAAACCTAAGCCAAGTGCAAAAACTTGGAGAACCTTGCTCGCAGCTTGCAGAATATACCGGAATTTTGAACTTGCAGAAAGAGTTATTGAGCATATAGTGGAGCTTAAGGCCCAAGAGGCAGGAGATTATGTTCTATTGTTGAACACTTACTCTGTAAATGGCAAATGGGATAAAGTATCAGAATTGAGGAAGTTCATGAAGGAAAACAGCATCTTAACAAAGCCTGGCTGTAGTACAATTGAACTCAAAGGAGTGGTGCACCAATTTGTTGCTGATGATATGTCTCATCCGCGCAAGGATGAAATATACAAGACGCTTGGAGAAATCAAGCAGCAACTGAAAATAGCTGGATATGTCCCTGAAACATCATCAGAGTTGCATAACTTACACACAGATGAGAAGGGCTTGGCACTCTCCTATCATAGTGAAAAACTGGCTATTGCTTTTGGGGTCCTTGCAACTCCTCCTGGCACAGCTATCAGAGTAGCCAACAGTATTCGAACTTGTGCTGATTGCCATCGCTTTGCTATAGTGTTTTCGACTGTGTACAACCGGAAGGTAATAATACGTGATCGCAATAGGTTGCATCATTTTAGAGAAGGAAACTGCTCCTGTGGTGACTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157359.p1 GENE.R_Transcript_157359~~R_Transcript_157359.p1 ORF type:5prime_partial len:648 (+),score=104.24,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5.1e-09,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|65,DYW_deaminase|PF14432.2|2.2e+03,DYW_deaminase|PF14432.2|5.2e-35,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.0077,PPR|PF01535.16|0.0025,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|7.1e-05,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|0.056,PPR|PF01535.16|1.1,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.17,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|8.3e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|65,PPR_1|PF12854.3|92,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.082,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.18 R_Transcript_157359:3-1946(+)
QTKLHSCESMTPRWYLRHSSSFPFTNPFFFYHYYYLYNRCFTSVSLLLLQDNPPHISSNFQNSLYPNPTSQYQKREHLFSLLKSCSSKPHFLQLHAQFIRSNLIQHPRLSLKFLTKAATFPPQNMTYLSKIFSQLMAPNVPHYNIIIMASDCASYGLKFFNRMRQDGFFPDPLTLSFCLKSFVKISGLLEGKQLHVRILVGGYTKDPILMNSLMNLYSVCGKCGDAYKVFDELPQRDTVDCNAMISCLMQNKRTRDALTVFDTMESSFGTHCRPDDVTCLLLIQVCGDLGALDFGRKVRDYVEEHGYGKFLKINNALITMYSKCGYVDEAYEIFKRIENKNLVSWSAMLSGFAMNGYGHDAIEMFWEMQRMGFSPDDKAFTGVLYACSHSGLLEEGLAFFDMMIKEFRVKPNSYHYGCVVDILGRAGLLSRAYDLIMSMKPKPSAKTWRTLLAACRIYRNFELAERVIEHIVELKAQEAGDYVLLLNTYSVNGKWDKVSELRKFMKENSILTKPGCSTIELKGVVHQFVADDMSHPRKDEIYKTLGEIKQQLKIAGYVPETSSELHNLHTDEKGLALSYHSEKLAIAFGVLATPPGTAIRVANSIRTCADCHRFAIVFSTVYNRKVIIRDRNRLHHFREGNCSCGDF*

Click here to download the sequence:
Link to NCBI Protein BLAST