Transcript Information: R_Transcript_157430.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93985435810205
Replicate 20.96730923327119
Replicate 30.93116819496555
Condition 2: 8 Hour
Replicate 10.92900300612854
Replicate 20.54538736198014
Replicate 31.0330184905911
Condition 3: 24 Hour
Replicate 11.3065418747474
Replicate 20.71724419156349
Replicate 30.77111154723486


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157430.p1 GENE.R_Transcript_157430~~R_Transcript_157430.p1 ORF type:complete len:369 (+),score=59.20,Skp1_POZ|PF03931.11|9.2e-23,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|2.4e-13 R_Transcript_157430:83-1189(+)
ATGAATGTTAGTCAGAATAAGTGGGTTGTCTTTAAGTGGCTTTCTATGGTGCTAAATGTGCTGATTGAATTGTGTCAAGCAATAGTAACTCAGGAGAACGGACAAGGTAAAATTAACCGTCACTTGTATCTTCGGATTTGCGTTGTTACCTCTTGTTGTTGCTTAATGGTATCCATCATTGAGATTATACGTGAATGGAAGGAAAGCAAAGTGGTGTGGAGACAGAGAAGTTTTTACTGGCAAGGGCAGCTAAAAGGGAGGTTCTCGGTCTATTTTGGCATCATAAGCTCTGTGGTCCAATTGGTGATTAATTTGGTAGCAGTAGTGAGGAAAAATAATGTGGTGAGATTCGATATCTTGCCATTGTTACTTTCGTTTGGTTATTTGATAGCTGCGATGGTTAATCCAGGGGAACAGACGAGGGTGATCTGCAGAATTCATAGTAGTTTCCCCTTGGTGTCTGTCTCAATCAAAAGCGTTTCGGGTTCTCAAGGAGCAACAGAATCTGTAGTGGCAACGTTGAGGCCGAAGATGGTGACACTCCAGAGCTCAGATGGGGAGAATTTTGAAGTAAATGAGGCAGTGGCGATGCAGTCGGAGCTCATAGAGGATATGATCGAACAAGGCTCGACTGACAATGACAGCATCATACCTCTGCCCCAGGTCAGCAGCCAGATACTGTCTAAGGTTGTTGAGTACATGATCAAGGAGCATGCTCAGGATGAAGAAGAAGATGAAGAGGAGGAAGGGGACGAGAAAGAGGTGTGGGATGCTGCACAGTTTGTGAAATCATTGAACCAGGATACTCTCTATGATCTCATATTGGCGGCACACTACCTGGAAATTGAGAGTCTTCTTGACTTGACCTGCGAGGCTGGAGCTAAGATGCTCGATGCAACTACTCCGGAGGGAGCAGAAGGGGAAAGGGGAGAGACAGCACTAGATGGGAATTCAGGACAATTAGCACGACAGCTGATCAGAAGTTGGCTCGAAGAACAAGAAAACAAACGAAAAATACGGCAAAAGATTAGGACTCATGCTCAAGTCAACCGAGCAGCATTTTTGTTTCAAGCTGCAGCAAACAAGGAAGGGGGAAAATCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157430.p1 GENE.R_Transcript_157430~~R_Transcript_157430.p1 ORF type:complete len:369 (+),score=59.20,Skp1_POZ|PF03931.11|9.2e-23,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|2.4e-13 R_Transcript_157430:83-1189(+)
MNVSQNKWVVFKWLSMVLNVLIELCQAIVTQENGQGKINRHLYLRICVVTSCCCLMVSIIEIIREWKESKVVWRQRSFYWQGQLKGRFSVYFGIISSVVQLVINLVAVVRKNNVVRFDILPLLLSFGYLIAAMVNPGEQTRVICRIHSSFPLVSVSIKSVSGSQGATESVVATLRPKMVTLQSSDGENFEVNEAVAMQSELIEDMIEQGSTDNDSIIPLPQVSSQILSKVVEYMIKEHAQDEEEDEEEEGDEKEVWDAAQFVKSLNQDTLYDLILAAHYLEIESLLDLTCEAGAKMLDATTPEGAEGERGETALDGNSGQLARQLIRSWLEEQENKRKIRQKIRTHAQVNRAAFLFQAAANKEGGKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST