Transcript Information: R_Transcript_157470.p1


Annotated TAIR IDAT4G13350.1
Annotated Gene NameNSP (nuclear shuttle protein)-interacting GTPase
Annotated Gene Symbol(s)NIG
Annotation TypeHomolog
Chromosome Positionchr4:7770170-7773321 | Reverse length=602
E-Value7E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4416351327294
Replicate 20.50819071071295
Replicate 30.64197226384121
Condition 2: 8 Hour
Replicate 10.43669058504641
Replicate 21.0824375923122
Replicate 31.2948919678238
Condition 3: 24 Hour
Replicate 11.1698245721123
Replicate 20.73049265115288
Replicate 31.0316497750512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157470.p1 GENE.R_Transcript_157470~~R_Transcript_157470.p1 ORF type:complete len:785 (+),score=160.82,ArfGap|PF01412.14|2.1e-25 R_Transcript_157470:227-2581(+)
ATGGTTAAGTCTAAGGAAGAGGATAGAATAGAGAAGCTAATTAGGGGTTTGTTGAAGCTCCCTGAGAATCGAAGATGCATCAATTGCAACAGTTTGGGACCACAATATGTTTGCACAACTTTCTGGACATTTGTTTGCACAAATTGCAGTGGAGTGCACCGGGAATTCACTCACCGTGTGAAATCTGTATCAATGGCTAAATTCACCTTGGAAGAAGTAAATGCTCTCCAAGCAGGTGGAAATGAGCAAGCGAGGCAAATCTATTTCAAAATATGGGATCCACAGCGTAATTTTTTCCCTGATAACAGTAATATTCAGAAACTTCGCGATTTTATAAAAAATGTCTATGTGGATAGACGATACACTGGTGAGCATCATCCAGCATTAGTGTCAAGGTTGAGAAAGAATGAGAAGGACGAGGCTAGTGAACGCAAAATTGCAGATACTGGTGAAAGATCCCCTTTCCGAGACAGATATGTCGATGGATATAGTAGATTTTCATATGATGAAGTGAGAAGTCTAGGGTATCCAAGAGAAAACTCTCGATATGGGGATTCTCGGAGTAGCTCCTCTCGTTTTGATAGTGCAGATTGCCGGTATCAAGTAGACAATGCAAGAATTGCTGGGCGGGCGGCTACTCAGATGTTCACCACTGAAGACATAAAGCTGAGAAGGAGGTCTCCTGATCGTTATCAGAATAGGGATTTCAATAGTCCCCCTCCTGTACGTCATGTAAGGGAAATTTTTGGAGAAAATTTTCTGTCTTTGCGTGTAGGAGATAGTCCCAAATCCAGTGACCGGAAAAGTGTGTCTGGTGCTGCCAGTGGTCAAATAAGCAATCTTTCCAAACCAAGGAATAAAAGCACAGATGGTCAAGAGAGTCCTGCCCAACGGTCTGGTGATCCTTCCAAGGCAAATCATAGAAGAAGTGCTTCAGCTTATTCTCAGATGCAGAGCATCGCGCGAACTGCCAGTCAAACATCTGTCAATGAAGCTGCAGTGAAACCCAAAAGTGAAAGTACAGGATCATTGGTTGATTTAGCCGCTTGTAATTCTCCAAATGCATCCATTCAGAAGGCAGTACAGAAAATGCAAGTTGTCAAGGATGGAGAAAACTCAGGCTCCCCTAAGCCACCAGTTAATGAAAGTGCTTCTTCCAGTGCCCCCCCCAGAAACACTTTGGAATTCTTGCTGTTTGAATTGTCTGGCCCTCCAGATATAACTCCGAAAGCCGGAGTGCCTAATGATGACAGTGCTGCATCAACTGCACCAGCTAGCAACTCATCACCTTTACGTCATATGTCAGCACCATCTACCTGTGTTAGTTCATGGATTACTTCATTGGCAACAATGTCTTCAAAAGACCCTAATATTGGTCTATCAGAATCTTCAGCACTTGAAATGGTTCCAACATTACCTAGTAATAGTTGTGATTCTTCACATGCTCAACCAACTCCAGTAATAGCTGACAAAGGTAATACAACAAGATCGAATGATGTAGGTGCTCCTGAAGTTACAAACCCTCAAATGGTGCCAGATTTGTTTGGAGATGAAAATCTTTCCACCATGAAAGAAGCTGACCACATGCGCTCTCCGACTATCCAGCAACCTGAACATTCAAGTGCCCCTATTTCAGATACCAGCTCTTCTGTAAATGGAGTTACAAACAATCAGCCAGGAACATTCTCATTTGAACCAAGTTGTGAAGTATCTAATTTCACTGCACAATCACCCAGTCCTCCTCTAGGTCCAACTCAAGAGACAAGCACTGCAGTAAGGGCACATGCTTCTCCTACAGAGGCAAAATCCAATGGGAGAAAAGAGCTTCCTGCAGACCTATTTGCTTCACTTCATCTGTCAGGTCCCTCAGGCCCAGGGTGGCAAACGGCTCCAAGTTCCAGCATAGGTTATAACATGCAATATCACCCTTCTTCAATGCAAATACCAGCATTTCCAAATGTGGGCAAGTCAACAAATCCGTTTGACATCAGTGACACCTCTGTCCATCACCAGGCCAACATGTCTTATCCTGTGCAGTTTCCATCAATGGCATCCTTGCAAGGTGGATTACCTAACGTGTCAGCTTCACCAGGCATATTACGGTCTGCAAGTTTGGGGTCTCATGTTCCAGGATTTCCACCAACCCAAGCACAGTCCTATACATCCAGTGCATATATGGCTGGTCAGGACTTTTACAATACCATGCCACCTTCTAGGCAACAAGGAGTTGTTGGTGGCTTTGGTAGTGAAGGAGGAATTCCAGGATCATTAAATTTGAATCAACAGAATCCATATGCATATTCATCATCTTCAAACTCGGGCTCTTTTCATATGGGAGGAAATCCATTTGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157470.p1 GENE.R_Transcript_157470~~R_Transcript_157470.p1 ORF type:complete len:785 (+),score=160.82,ArfGap|PF01412.14|2.1e-25 R_Transcript_157470:227-2581(+)
MVKSKEEDRIEKLIRGLLKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGVHREFTHRVKSVSMAKFTLEEVNALQAGGNEQARQIYFKIWDPQRNFFPDNSNIQKLRDFIKNVYVDRRYTGEHHPALVSRLRKNEKDEASERKIADTGERSPFRDRYVDGYSRFSYDEVRSLGYPRENSRYGDSRSSSSRFDSADCRYQVDNARIAGRAATQMFTTEDIKLRRRSPDRYQNRDFNSPPPVRHVREIFGENFLSLRVGDSPKSSDRKSVSGAASGQISNLSKPRNKSTDGQESPAQRSGDPSKANHRRSASAYSQMQSIARTASQTSVNEAAVKPKSESTGSLVDLAACNSPNASIQKAVQKMQVVKDGENSGSPKPPVNESASSSAPPRNTLEFLLFELSGPPDITPKAGVPNDDSAASTAPASNSSPLRHMSAPSTCVSSWITSLATMSSKDPNIGLSESSALEMVPTLPSNSCDSSHAQPTPVIADKGNTTRSNDVGAPEVTNPQMVPDLFGDENLSTMKEADHMRSPTIQQPEHSSAPISDTSSSVNGVTNNQPGTFSFEPSCEVSNFTAQSPSPPLGPTQETSTAVRAHASPTEAKSNGRKELPADLFASLHLSGPSGPGWQTAPSSSIGYNMQYHPSSMQIPAFPNVGKSTNPFDISDTSVHHQANMSYPVQFPSMASLQGGLPNVSASPGILRSASLGSHVPGFPPTQAQSYTSSAYMAGQDFYNTMPPSRQQGVVGGFGSEGGIPGSLNLNQQNPYAYSSSSNSGSFHMGGNPFG*

Click here to download the sequence:
Link to NCBI Protein BLAST