Transcript Information: R_Transcript_157591.p1


Annotated TAIR IDAT5G50990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20739453-20741281 | Forward length=534
E-Value3.1E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3085762449155
Replicate 20.73332666895159
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 11.3953342157438
Replicate 20.69877755753705
Replicate 31.7684473582362
Condition 3: 24 Hour
Replicate 11.5192666547745
Replicate 21.013568882839
Replicate 31.6496248017698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157591.p1 GENE.R_Transcript_157591~~R_Transcript_157591.p1 ORF type:complete len:544 (+),score=106.41,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0043,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|0.059,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.0024,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|3.2e+02,PPR_2|PF13041.2|0.00065,PPR_2|PF13041.2|4.8e-14,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|7,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2.9e+03,DYW_deaminase|PF14432.2|3.3e-34,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.8e+02,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|0.0088,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|5.1e+03 R_Transcript_157591:153-1784(+)
ATGCCATTGCCAAAGAGAGGTTTTAATATTCAACAATCCTCACGCCTTTTCTCTCTCTTTCGCTTTTCGCCCCAAACTTCATGCCATCCCCATTTCGCCGCTAAAACCACAGATGATCAAATGCTTACAAGTGTTGTTCATGATTGCAAAACATCCTTGGATTTGAGATCTGCATTAAAATCACATGCAACAATTGTGAAAGCCGGATTTAGTATGGATCCTCCACTCGTATCTTCCCTTCTGCGAACGTACATTAGTTGTGGCCATCTTCATCTTGCACACTGGCTTTTGGACGAGACTCCCTGTCAGAATCTTGATTTGGTTACCTGCAATAAATTGATTGCAAGTTTCATGAAGAATAAAGATGTTGATGCTGCCAAAAGGTTGTTTTTTAATATGCCTTCTAAAGATGTTGTCTCTTGGAATTCTATGATTGGTGGCTGTGTCAAGAATTCTCAATTTGAGGAGGCATTGAGGTTCTTCAAAGTTATGTGTTCTTTGAGTGTTGAGCCGGATAAGTTTACGTTTTCTTCCGTTATTGCAGCATGTGCACGACTTGGAGCCCTTGATAATGCTTTGTGGATACATGATCTGTTGATTGGGAAGAAAATCATTTTGAGTGACATTTTGCTTGCTGCACTGATAAACATGTATGCAAAATGTGGGCAAATTGAAAAAGCAAAAGAAGTTTTCGATGGGACTCAGAGCAGTGATGTATCAGTTTGGAATGCCATGATTACTGGCTTAGCAATTCATGGACTTGCTGTTGATGCTGTTTCTGTGTTCTGTGAGATGGAGAAGAAAAATGTTTCTCCGGATGGTGCAACTTTCCTTGGAATTCTAACTGCATGTAGTCATTGTGGCTTAGTTGAACTGGGAGAGAGATACTTTAATATTATGAGAGAGAAATACTCAGTGGAACCACAACTTGAGCATTATAGCACTATGGTGGATCTCTTTGGCCGTGCAGGACGCCTAGAAGAAGCTTATGACACCATCAAAGCTATGCCAATGGAACCTGATGCGGTGGTATGGAGGACTCTCCTTAGTGCTTGTAGAACTCACAAAAACTCGGTATTAGGGGAAATTGCTATTTCAAACATATCTTCTTCTCTTGATGGTGGTGATTATGTCTTGCTCTCAAACACTTACTGTTCCTTAGACCGGTGGAGTAGCTCTGCCAACATGAGAAATGTGATGAGAAGGGAGGGAGTTCGAAAGGACCGTGGAAAGAGTTGGATCGAGTTGGCTGGTGTTATATATCATTTTAGGGCTGGCGATCAGTTGCATCCTGAAATAGAGGCAATATACAATGTTCTGAAAAAATTGATTGGACGAAGCAAGTTGCAAGGTTTTGTTCCAGCAACTGAGCTAGTTTTGATGGATGTCTCCGAGGAGGAAAAGGAGGAGAACCTGAATTTTCACAGTGAAAAATTGGCTTTGGCTTTTGGGGTCCTTAAAACAAGTCCTGTGACAGAAATTCGAATTTCAAAGAACTTGCGAACATGTGCTGACTGTCATTCTTGGTTTAAAATAGTCTCGAAGATGTTGAGAAGGGTGATCATCGTCAGGGATCGAATTCGATTTCACAAGTTTGAAGGTGGTTCTTGCTCTTGTGGAGATTACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157591.p1 GENE.R_Transcript_157591~~R_Transcript_157591.p1 ORF type:complete len:544 (+),score=106.41,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0043,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|0.059,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.0024,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|3.2e+02,PPR_2|PF13041.2|0.00065,PPR_2|PF13041.2|4.8e-14,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|7,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2.9e+03,DYW_deaminase|PF14432.2|3.3e-34,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.8e+02,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|0.0088,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|5.1e+03 R_Transcript_157591:153-1784(+)
MPLPKRGFNIQQSSRLFSLFRFSPQTSCHPHFAAKTTDDQMLTSVVHDCKTSLDLRSALKSHATIVKAGFSMDPPLVSSLLRTYISCGHLHLAHWLLDETPCQNLDLVTCNKLIASFMKNKDVDAAKRLFFNMPSKDVVSWNSMIGGCVKNSQFEEALRFFKVMCSLSVEPDKFTFSSVIAACARLGALDNALWIHDLLIGKKIILSDILLAALINMYAKCGQIEKAKEVFDGTQSSDVSVWNAMITGLAIHGLAVDAVSVFCEMEKKNVSPDGATFLGILTACSHCGLVELGERYFNIMREKYSVEPQLEHYSTMVDLFGRAGRLEEAYDTIKAMPMEPDAVVWRTLLSACRTHKNSVLGEIAISNISSSLDGGDYVLLSNTYCSLDRWSSSANMRNVMRREGVRKDRGKSWIELAGVIYHFRAGDQLHPEIEAIYNVLKKLIGRSKLQGFVPATELVLMDVSEEEKEENLNFHSEKLALAFGVLKTSPVTEIRISKNLRTCADCHSWFKIVSKMLRRVIIVRDRIRFHKFEGGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST