Transcript Information: R_Transcript_15780.p1


Annotated TAIR IDAT5G62940.1
Annotated Gene NameDof-type zinc finger DNA-binding family protein
Annotated Gene Symbol(s)HCA2, DOF5.6
Annotation TypeOrtholog
Chromosome Positionchr5:25257183-25258504 | Reverse length=372
E-Value5.4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9862788291915
Replicate 21.7698031002244
Replicate 34.3882639073089
Condition 2: 8 Hour
Replicate 11.5010491921683
Replicate 23.5983028250184
Replicate 32.642763232087
Condition 3: 24 Hour
Replicate 15.5415396756527
Replicate 22.7885959516822
Replicate 34.7800734373684


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15780.p1 GENE.R_Transcript_15780~~R_Transcript_15780.p1 ORF type:complete len:261 (+),score=58.42,zf-Dof|PF02701.11|7.4e-32 R_Transcript_15780:732-1514(+)
ATGGACCAACAAATTCCACCAGCCCACCAGCAAAACAACCGGCGAATACAGCCGGTGCTCGGCCCCAACCAGAATCAGCACCCGCCGCCACAGCCGTGCCCGCGGTGTCACTCAAGCAACACCAAATTCTGCTACTACAACAACTACAACTTCTCTCAACCTCGTCACTTTTGCAAGTCCTGTCGCCGTTACTGGACTCACGGCGGCACTCTCCGTGACATCCCTGTCGGCGGTGGTTCCCGCAAGACCGCCAAGCGCTCTCGCACCTCCTCTTCATCCCCCACCTCTTCCTCCACCATCACCACTCTCAGTAGTGGTGGTAGTGGGTCCCTCTCTCAGCCACTCATGGATCCCACTCCTCCTACCCCCGTCTTTGTTTCTCTCCCCTCCAGTGGCCCCCTCCCCATCAATGGCGGTGGCGGGGGGAGTAGTACAACTACCAGTAGTTTTACTTCTCTGCTGAGTAGTAGTGGGCCTGGGATTCTGGCTCTGGGTGGGTTTGGGCTTGGCCTTGATGATGTTGGCTTTGGGCTTGGTCGTGGTGTTTGGGCTTTTCCTGATGTCGGCTACGTCACTGGTGCTGGGATTCCCCCTGCTGCTCACGTTGTTGTTGGTGATGGAGGGGATCACCACAGTGGAATTGGAGGAGGTGGAGGTGGGAGCAGAGCTGACACGTGGCACGTCGAGACTGGTGAGACTACTGGGTTTGGTGTTGCAGCAAATGATTGTTTCTCTTCCTTGCCTGAGCTTGCTATTTCCACTCCTGGAAATGGCCTCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15780.p1 GENE.R_Transcript_15780~~R_Transcript_15780.p1 ORF type:complete len:261 (+),score=58.42,zf-Dof|PF02701.11|7.4e-32 R_Transcript_15780:732-1514(+)
MDQQIPPAHQQNNRRIQPVLGPNQNQHPPPQPCPRCHSSNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKTAKRSRTSSSSPTSSSTITTLSSGGSGSLSQPLMDPTPPTPVFVSLPSSGPLPINGGGGGSSTTTSSFTSLLSSSGPGILALGGFGLGLDDVGFGLGRGVWAFPDVGYVTGAGIPPAAHVVVGDGGDHHSGIGGGGGGSRADTWHVETGETTGFGVAANDCFSSLPELAISTPGNGLK*

Click here to download the sequence:
Link to NCBI Protein BLAST