Transcript Information: R_Transcript_158032.p1


Annotated TAIR IDAT5G41960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16789760-16790868 | Forward length=217
E-Value8.9E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6710457212067
Replicate 20.14786127053731
Replicate 31.1292053744582
Condition 2: 8 Hour
Replicate 11.7243566864257
Replicate 21.7321809876975
Replicate 31.1504541942499
Condition 3: 24 Hour
Replicate 11.4550722890798
Replicate 20.77659362290765
Replicate 31.8496651848082


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158032.p1 GENE.R_Transcript_158032~~R_Transcript_158032.p1 ORF type:internal len:142 (+),score=6.58 R_Transcript_158032:2-424(+)
CAGAACGCTGCTAATTCATCAGGTATCTTTAACTCGAGTTGTGCGTACAACAAAAACCTCTATGCATGTATGTATGTTGAAGTTTTTCTCTTGGTTCTTTTACAGCTGAGAGGAATTGCAACTGGAAGAGGAAGAGGTGTACTAATATGTCGGGCGGAGTTTTCTCAAGACGCGCCTTTTGCCGTAGCCATAGGCGCGTGTATGCTCAACTCCCTCGTGTTTCCCTACATGGGCGACAAAGATGACGATGGTGATGAAGATGAAGAGTCGCCGGCGATGGGCGCCAGCGACGCTAGGTTTGCGGTTATGACCATAATTAGCTTCATCCCTTACTTCAATTGGTTGAGCTGGGTTTTTGCTTTGACGGATACGAGCAAGCTTAGATATGCTGTTTACGCTGCTGTTTATTTGGCCCCTTACCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158032.p1 GENE.R_Transcript_158032~~R_Transcript_158032.p1 ORF type:internal len:142 (+),score=6.58 R_Transcript_158032:2-424(+)
QNAANSSGIFNSSCAYNKNLYACMYVEVFLLVLLQLRGIATGRGRGVLICRAEFSQDAPFAVAIGACMLNSLVFPYMGDKDDDGDEDEESPAMGASDARFAVMTIISFIPYFNWLSWVFALTDTSKLRYAVYAAVYLAPYL

Click here to download the sequence:
Link to NCBI Protein BLAST