Transcript Information: R_Transcript_158114.p1


Annotated TAIR IDAT2G47450.1
Annotated Gene Namechloroplast signal recognition particle component (CAO)
Annotated Gene Symbol(s)CAO, CPSRP43
Annotation TypeOrtholog
Chromosome Positionchr2:19472781-19473902 | Forward length=373
E-Value3.3E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7916778794826
Replicate 20.91288262679557
Replicate 31.4385873852656
Condition 2: 8 Hour
Replicate 11.7743380396555
Replicate 21.350294797173
Replicate 31.3591785730241
Condition 3: 24 Hour
Replicate 11.497248297459
Replicate 20.85237715519139
Replicate 30.47581966710646


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158114.p1 GENE.R_Transcript_158114~~R_Transcript_158114.p1 ORF type:complete len:414 (+),score=52.83,Chromo|PF00385.20|0.48,Chromo|PF00385.20|0.047,Chromo|PF00385.20|2.1e-05,Ank_5|PF13857.2|3.4,Ank_5|PF13857.2|2.3,Ank_5|PF13857.2|1.7e-08,Ank_4|PF13637.2|1.7,Ank_4|PF13637.2|0.0003,Ank_2|PF12796.3|5.3e-07,Ank_3|PF13606.2|8.5e+03,Ank_3|PF13606.2|1.4e+02,Ank_3|PF13606.2|0.00025,Ank_3|PF13606.2|1.2e+04,Mtf2_C|PF14061.2|1.2,Mtf2_C|PF14061.2|1.1e+02,Mtf2_C|PF14061.2|0.046,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|16,Ank|PF00023.26|0.031,Ank|PF00023.26|9.5e+02 R_Transcript_158114:115-1242(+)
ATGGACTCCCTCTCTATCACTCCCCACCTCTCTCGACTCAAACTCACCTCCAACCTCCCTTTCTCTTCTCCTCACTTCCTTTCACCTCAACATCTCAACCACCACTATCACCTCCGCCGCCTCAATCTCCGCCTTCTAGCCACCCAAAACCAAGACCAAACACCACCATTCACAAATTTCCAAGACTACGATGAAGATGAGTCTTATGGTGAAGTCAACAAAATCATTGGTAGTAGATCATCCTACACCCCTACCGGCAACCCCAAGATGGAGTACTTAATTGAGTGGAAAGATGACCATGCACCCACATGGGTCCCATCCCAGCTCATCGCCGCCGACGTCGTCTCCGAGTACGAGTCCCCCTGGTGGACCGCCGCGAAGAAAGCCGACGCTGAGGAGCTCCGGCGGATCATCGACTCCGACGAGGGCAGTGGCCGCGACGTCAACGCCGTGGACCCTGACGGCCGGACTGCCCTCCACTTCGTGTCGGGCCTCGGCTCCGGCGAGGCTGTCGGAGTCCTCGCTGGAGCCGGCGCCGTTGTTGACCGGCAGGATTTTTCCAGCGGGCTGACGCCACTCCATATGGCGGCCGGGTACGCTCGGCCCGAAGCTACCCGGGCTTTGATCGAATTCGGGGCTGACCCGGAAGTTGAGGATGAGAAGGGGCGTACACCGTTGGAGCTTGCGCGGGAAATATTGGCAGTTACGCCTAAAGGAAACCCTTTGCAATTTGGGAGGAGATTAGCGCTTGAGAATGTGATTAAGGTTTTAGAAGGGGCGGTTTTTGAATATGCGGAAGTTGAAGGGGTTTTGGAGAAAAGAGGGAAAGGAGAGAATTTGGAGTATTTGGTTAAGTGGAGGGATGGTGGGGAGAATGAGTGGGTTAAGGCTGGGCTTATAGCTGAGGATTTGGTTAGGGATTTTGAAGCCGGGCTCGAGTATGCCGAGGCCCAAGGCGTGGTGGGTAAACGGGTCGGAGATGACGGGAAAACGGAGTTTTTAGTAAAGTGGGTCGATATCGAAGAGCCTACTTGGGAACCCGAGGAGAATGTGGATCCAGATTTGGTAATGGAGTTTGAGGAGACGCAAGTTGGTAAAGAGGTTCAATTGAGTAGTAACATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158114.p1 GENE.R_Transcript_158114~~R_Transcript_158114.p1 ORF type:complete len:414 (+),score=52.83,Chromo|PF00385.20|0.48,Chromo|PF00385.20|0.047,Chromo|PF00385.20|2.1e-05,Ank_5|PF13857.2|3.4,Ank_5|PF13857.2|2.3,Ank_5|PF13857.2|1.7e-08,Ank_4|PF13637.2|1.7,Ank_4|PF13637.2|0.0003,Ank_2|PF12796.3|5.3e-07,Ank_3|PF13606.2|8.5e+03,Ank_3|PF13606.2|1.4e+02,Ank_3|PF13606.2|0.00025,Ank_3|PF13606.2|1.2e+04,Mtf2_C|PF14061.2|1.2,Mtf2_C|PF14061.2|1.1e+02,Mtf2_C|PF14061.2|0.046,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|16,Ank|PF00023.26|0.031,Ank|PF00023.26|9.5e+02 R_Transcript_158114:115-1242(+)
MDSLSITPHLSRLKLTSNLPFSSPHFLSPQHLNHHYHLRRLNLRLLATQNQDQTPPFTNFQDYDEDESYGEVNKIIGSRSSYTPTGNPKMEYLIEWKDDHAPTWVPSQLIAADVVSEYESPWWTAAKKADAEELRRIIDSDEGSGRDVNAVDPDGRTALHFVSGLGSGEAVGVLAGAGAVVDRQDFSSGLTPLHMAAGYARPEATRALIEFGADPEVEDEKGRTPLELAREILAVTPKGNPLQFGRRLALENVIKVLEGAVFEYAEVEGVLEKRGKGENLEYLVKWRDGGENEWVKAGLIAEDLVRDFEAGLEYAEAQGVVGKRVGDDGKTEFLVKWVDIEEPTWEPEENVDPDLVMEFEETQVGKEVQLSSNIS*

Click here to download the sequence:
Link to NCBI Protein BLAST