Transcript Information: R_Transcript_158256.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.48737739566282
Condition 2: 8 Hour
Replicate 10.20839033997656
Replicate 20
Replicate 30.15448179251393
Condition 3: 24 Hour
Replicate 10.19538559342727
Replicate 20.18770433098364
Replicate 30.27941750664124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158256.p1 GENE.R_Transcript_158256~~R_Transcript_158256.p1 ORF type:3prime_partial len:235 (+),score=40.30,PPR_2|PF13041.2|9.1e-20,PPR_2|PF13041.2|3.7e-19,PPR_2|PF13041.2|8.8e-20,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|7.6e-14,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.1e-15,PPR_1|PF12854.3|7e-13,PPR_1|PF12854.3|8.5e-12,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|1.6e-05,PPR|PF01535.16|6.8e-10,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|3.5e-10,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.57,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|1.7e-06,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|4.8e-05,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|22,ATP13|PF12921.3|2.6,ATP13|PF12921.3|13,ATP13|PF12921.3|86,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|3.2,MRP-S27|PF10037.5|0.57,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|3.3,MRP-S27|PF10037.5|2.6e+02 R_Transcript_158256:56-703(+)
ATGGATGAGGCATTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTGATCAATGGATATTGCAAGGCTAAAAACGTTGATGCAGCTTTCAACTTGTTCCACGAAATGGCTCTTGAGGGCCCCTCACCTGATATTTATACGTACAACACTCTCATCGATGGCTTGTCCAAGAACGATAGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAATCTCATGGACCACATCCAAATGTTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATGTCAATGCTGATTCAAATGGAGAATAATGGAGTTGCCCCCACTGTTGTCATCTTTAATATCCTAATTGACGGTCTATGTGAAGTTGGGAGACTTGGAGAAGCAGTCACATTCTTCTCTTCTCTCCAGTCTAGGGGGTTACAACCAAATCAGCGTACATATAACGTAATGATCAAAGGACTTTGCAAGCAAGGGAGGATAGGTGATCCCCATAAACTATTAACAGTGATGGAGGAAAATGGATGTCCTCCAGATGCTTGCACCTACAACACAATCATCAGAGGATTTCTTCACGATAATGATATAAGCACAGCTTTGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158256.p1 GENE.R_Transcript_158256~~R_Transcript_158256.p1 ORF type:3prime_partial len:235 (+),score=40.30,PPR_2|PF13041.2|9.1e-20,PPR_2|PF13041.2|3.7e-19,PPR_2|PF13041.2|8.8e-20,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|7.6e-14,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.1e-15,PPR_1|PF12854.3|7e-13,PPR_1|PF12854.3|8.5e-12,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|1.6e-05,PPR|PF01535.16|6.8e-10,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|3.5e-10,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.57,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|1.7e-06,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|4.8e-05,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|22,ATP13|PF12921.3|2.6,ATP13|PF12921.3|13,ATP13|PF12921.3|86,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|3.2,MRP-S27|PF10037.5|0.57,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|3.3,MRP-S27|PF10037.5|2.6e+02 R_Transcript_158256:56-703(+)
MDEALQLMDFMVEKGCHPNVVTLNSLINGYCKAKNVDAAFNLFHEMALEGPSPDIYTYNTLIDGLSKNDRLESAFQLFEEMKSHGPHPNVVTYASLLDGLCKNTQVDEAMSMLIQMENNGVAPTVVIFNILIDGLCEVGRLGEAVTFFSSLQSRGLQPNQRTYNVMIKGLCKQGRIGDPHKLLTVMEENGCPPDACTYNTIIRGFLHDNDISTALE

Click here to download the sequence:
Link to NCBI Protein BLAST