Transcript Information: R_Transcript_158257.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0505301268903
Replicate 20.98184138637365
Replicate 31.3183733868289
Condition 2: 8 Hour
Replicate 11.2331011124512
Replicate 20.48260896060113
Replicate 31.1752841408884
Condition 3: 24 Hour
Replicate 10.3303281615497
Replicate 21.3487028817979
Replicate 30.39366375336146


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158257.p1 GENE.R_Transcript_158257~~R_Transcript_158257.p1 ORF type:complete len:278 (+),score=49.70,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|5e-19,PPR_2|PF13041.2|3.1e-20,PPR_2|PF13041.2|5.1e-09,PPR_2|PF13041.2|2.4e-16,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|6.1e-09,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|1.4e-15,PPR_1|PF12854.3|8.9e-13,PPR_1|PF12854.3|3.5e-12,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|9.8e-11,PPR_1|PF12854.3|5.5e-08,PPR|PF01535.16|8.7e-10,PPR|PF01535.16|2.8e-08,PPR|PF01535.16|6e-10,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|4.7e-07,PPR|PF01535.16|0.00065,PPR_3|PF13812.2|6e-06,PPR_3|PF13812.2|2.1e-06,PPR_3|PF13812.2|3.7e-08,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.00041,PPR_3|PF13812.2|0.007,PPR_3|PF13812.2|9e+03,ATP13|PF12921.3|2.9,ATP13|PF12921.3|18,ATP13|PF12921.3|2.3e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|0.12,MRP-S27|PF10037.5|0.81,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.5 R_Transcript_158257:56-835(+)
ATGGATGAGGCATTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTGATCAATGGATATTGCAAGGCTAAAAACGTTGATGCAGCTTTCAACTTGTTCCACGAAATGGCTCTTGAGGGCCCCTCACCTGATATTTATACGTACAACACTCTCATCGATGGCTTGTCCAAGAACGATAGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTACATCCAGATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATATCAATGCTAAAGCAAATGGACAAGAATGGGGTGGTCCCTATCATTACCATCTTCAATATCTTAATTGATGGTTTATGTCAAGCAGGAAGACTTGGAGAAGCACTCACATTCTTCTCTTCTCTCGAGTCCAAGGGGTTACAACCTAATCAGTGTACGTACAATGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATCAAGTGATGCACGTAAACTATTGACAGTGATGGAGGTAAATGGATGTCCTCCAGATGCTTGCACCTACAACACAATCATCAGAGGATTTCTTCACGATAATGATATAAGCACAGCTTTGGAACTCGTAGACATTATGAAAGCCAAGCACTTTCCAGCTGATGCTGGAACCACTTCATTACTTCTTAACTTATTGACTGCTCATCATGTTAACAGAACAGACAAGGCATTGCTTCAAAAATACTTTGGGATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158257.p1 GENE.R_Transcript_158257~~R_Transcript_158257.p1 ORF type:complete len:278 (+),score=49.70,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|5e-19,PPR_2|PF13041.2|3.1e-20,PPR_2|PF13041.2|5.1e-09,PPR_2|PF13041.2|2.4e-16,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|6.1e-09,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|1.4e-15,PPR_1|PF12854.3|8.9e-13,PPR_1|PF12854.3|3.5e-12,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|9.8e-11,PPR_1|PF12854.3|5.5e-08,PPR|PF01535.16|8.7e-10,PPR|PF01535.16|2.8e-08,PPR|PF01535.16|6e-10,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|4.7e-07,PPR|PF01535.16|0.00065,PPR_3|PF13812.2|6e-06,PPR_3|PF13812.2|2.1e-06,PPR_3|PF13812.2|3.7e-08,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.00041,PPR_3|PF13812.2|0.007,PPR_3|PF13812.2|9e+03,ATP13|PF12921.3|2.9,ATP13|PF12921.3|18,ATP13|PF12921.3|2.3e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|0.12,MRP-S27|PF10037.5|0.81,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.5 R_Transcript_158257:56-835(+)
MDEALQLMDFMVEKGCHPNVVTLNSLINGYCKAKNVDAAFNLFHEMALEGPSPDIYTYNTLIDGLSKNDRLESAFQLFEEMKAHGLHPDAVTYASLLDGLCKNTQVDEAISMLKQMDKNGVVPIITIFNILIDGLCQAGRLGEALTFFSSLESKGLQPNQCTYNVMIKGLCKQGKSSDARKLLTVMEVNGCPPDACTYNTIIRGFLHDNDISTALELVDIMKAKHFPADAGTTSLLLNLLTAHHVNRTDKALLQKYFGI*

Click here to download the sequence:
Link to NCBI Protein BLAST