Transcript Information: R_Transcript_158258.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4824026898417
Replicate 20.50391120999115
Replicate 31.2827773053845
Condition 2: 8 Hour
Replicate 11.2732649772567
Replicate 21.7888705472949
Replicate 32.250799716928
Condition 3: 24 Hour
Replicate 12.2039494938596
Replicate 22.6466310668693
Replicate 31.7510163749518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158258.p1 GENE.R_Transcript_158258~~R_Transcript_158258.p1 ORF type:complete len:250 (+),score=45.81,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|9.9e-20,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|2e-18,PPR_2|PF13041.2|5.1e-16,PPR_2|PF13041.2|3.2e-06,PPR_1|PF12854.3|4.5e-12,PPR_1|PF12854.3|7.7e-13,PPR_1|PF12854.3|9.4e-12,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|3.6e-06,PPR|PF01535.16|8e-08,PPR|PF01535.16|3.8e-10,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|0.022,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|1.3e-07,PPR_3|PF13812.2|5.3e-05,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|1.6e+04,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|4.8,MRP-S27|PF10037.5|10 R_Transcript_158258:1-750(+)
ATGGAGGAAAAGGGTTGCCAGCCTGATGTTGTGACTTTCAACTCCATGATCAACGGATATTACAAGGCTAAAAACATTGATGCAGCTTTCAACTTGTTCCACGAAATGGCTCTTGAGGGCCCCTCACCTGATATTTATACGTACAACACTCTCATCGATGGCTTGTCCAAGAACGATAGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAATCTCATGGACCACATCCAAATGTTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATGTCAATGCTGATTCAAATGGAGAATAATGGAGTTGCCCCCACTGTTGTCATCTTTAATATCCTAATTGACGGTCTATGTGAAGTTGGGAGACTTGGAGAAGCAGTCACATTCTTCTCTTCTCTCCAGTCTAGGGGGTTACAACCAAATCAGCGTACATATAACGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATTAGGTGAAGCCCGTAAACTATTAGCAGTGATGGAGGAAAATGGATGTCTTCCAGATGAATGTACCTACAACACGATCATTCGAGGATTCTTTCATGGTAAGGATACCAGAACAGCTTTGGAACTCGTAGACATTTTGAAAGCCAAGCGCTTTGCAGCTGATGCTGGTACCACTTCAGTAGTTCTTAACTTATTGACTGCTCATCATGTTAACAGAACAGACAAGGCATTGCTTCAAAAATACTTTGGGATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158258.p1 GENE.R_Transcript_158258~~R_Transcript_158258.p1 ORF type:complete len:250 (+),score=45.81,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|9.9e-20,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|2e-18,PPR_2|PF13041.2|5.1e-16,PPR_2|PF13041.2|3.2e-06,PPR_1|PF12854.3|4.5e-12,PPR_1|PF12854.3|7.7e-13,PPR_1|PF12854.3|9.4e-12,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|3.6e-06,PPR|PF01535.16|8e-08,PPR|PF01535.16|3.8e-10,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|0.022,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|1.3e-07,PPR_3|PF13812.2|5.3e-05,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|1.6e+04,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|4.8,MRP-S27|PF10037.5|10 R_Transcript_158258:1-750(+)
MEEKGCQPDVVTFNSMINGYYKAKNIDAAFNLFHEMALEGPSPDIYTYNTLIDGLSKNDRLESAFQLFEEMKSHGPHPNVVTYASLLDGLCKNTQVDEAMSMLIQMENNGVAPTVVIFNILIDGLCEVGRLGEAVTFFSSLQSRGLQPNQRTYNVMIKGLCKQGKLGEARKLLAVMEENGCLPDECTYNTIIRGFFHGKDTRTALELVDILKAKRFAADAGTTSVVLNLLTAHHVNRTDKALLQKYFGI*

Click here to download the sequence:
Link to NCBI Protein BLAST