Transcript Information: R_Transcript_158260.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3788207915435
Replicate 20.90631512588337
Replicate 31.4831700601825
Condition 2: 8 Hour
Replicate 10.96886515978308
Replicate 20.8847830944354
Replicate 31.240577704271
Condition 3: 24 Hour
Replicate 11.4038946865862
Replicate 20.31734185454068
Replicate 31.4959222627736


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158260.p1 GENE.R_Transcript_158260~~R_Transcript_158260.p1 ORF type:complete len:278 (+),score=50.21,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|4.4e-19,PPR_2|PF13041.2|5.5e-20,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|4.5e-16,PPR_2|PF13041.2|2.2e-07,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|3.2e-15,PPR_1|PF12854.3|1e-13,PPR_1|PF12854.3|3.5e-12,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|3.2e-06,PPR|PF01535.16|8.7e-10,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|4.4e-10,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0055,PPR_3|PF13812.2|6e-06,PPR_3|PF13812.2|0.00041,PPR_3|PF13812.2|5.5e-09,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.69,MRP-S27|PF10037.5|96,MRP-S27|PF10037.5|4.2e-05,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|3.6,ATP13|PF12921.3|3.3,ATP13|PF12921.3|0.74,ATP13|PF12921.3|62,ATP13|PF12921.3|38,ATP13|PF12921.3|0.086 R_Transcript_158260:56-835(+)
ATGGATGAGGCATTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTGATCAATGGATATTGCAAGGCTAAAAACGTTGATACAGCTCTCAAACTTTTCCAGAAAATGTCTCTTATGGGACTAACACCTGATTTGTATACGTACAACACTCTCATTGATGGCTTGTCCAAGAATAATCGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTACATCCAGATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATATCAATGCTAAAGCAAATGGACAAGAATGGGGTGGTCCCTATCATTACCATCTTCAATATCTTAATTGATGGTTTATGTCAAGCAGGAAGACTTGGAGAAGCACTCACATTCTTCTCTTCTCTCGAGTCCAAGGGGTTACAACCTAATCAGTGTACGTACAATGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATCAAGTGATGCACATAAACTATTAACAGTGATGGAGGAAAATGGATGTCCTCCAGATGCTTGCACCTACAACACAATCATCAGAGGATTTCTTCACGATAATGATATAAGCACAGCTTTGGAATTTATCCACATTATGACTGCCAAAAACTTTGCAGCTGATGCTGGAACTACTTCAATAATTTTTGAATTATTGACTACTTGTCACATTAGCAGTGCAGACAAGGCATTGCTTCAAAAATACTTTGGGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158260.p1 GENE.R_Transcript_158260~~R_Transcript_158260.p1 ORF type:complete len:278 (+),score=50.21,PPR_2|PF13041.2|1.2e-19,PPR_2|PF13041.2|4.4e-19,PPR_2|PF13041.2|5.5e-20,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|2e-16,PPR_2|PF13041.2|4.5e-16,PPR_2|PF13041.2|2.2e-07,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|3.2e-15,PPR_1|PF12854.3|1e-13,PPR_1|PF12854.3|3.5e-12,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|3.2e-06,PPR|PF01535.16|8.7e-10,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|4.4e-10,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0055,PPR_3|PF13812.2|6e-06,PPR_3|PF13812.2|0.00041,PPR_3|PF13812.2|5.5e-09,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.69,MRP-S27|PF10037.5|96,MRP-S27|PF10037.5|4.2e-05,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|3.6,ATP13|PF12921.3|3.3,ATP13|PF12921.3|0.74,ATP13|PF12921.3|62,ATP13|PF12921.3|38,ATP13|PF12921.3|0.086 R_Transcript_158260:56-835(+)
MDEALQLMDFMVEKGCHPNVVTLNSLINGYCKAKNVDTALKLFQKMSLMGLTPDLYTYNTLIDGLSKNNRLESAFQLFEEMKAHGLHPDAVTYASLLDGLCKNTQVDEAISMLKQMDKNGVVPIITIFNILIDGLCQAGRLGEALTFFSSLESKGLQPNQCTYNVMIKGLCKQGKSSDAHKLLTVMEENGCPPDACTYNTIIRGFLHDNDISTALEFIHIMTAKNFAADAGTTSIIFELLTTCHISSADKALLQKYFGI*

Click here to download the sequence:
Link to NCBI Protein BLAST