Transcript Information: R_Transcript_158481.p1


Annotated TAIR IDAT1G03790.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)SOM
Annotation TypeOrtholog
Chromosome Positionchr1:954589-955770 | Forward length=393
E-Value5.4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1582938175495
Replicate 21.8507377266646
Replicate 33.4812671118773
Condition 2: 8 Hour
Replicate 12.9770048568079
Replicate 22.242884804739
Replicate 32.5379151627289
Condition 3: 24 Hour
Replicate 16.9082763390356
Replicate 22.5474159204922
Replicate 37.9168293548352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158481.p1 GENE.R_Transcript_158481~~R_Transcript_158481.p1 ORF type:5prime_partial len:329 (+),score=-6.37 R_Transcript_158481:2-988(+)
TCGGACACCACTACACTCCAATTCCAAAACAAATTTCCCAAACAAAAAATGATGATCGGAGAGACACACCGTCACCACCAAAGCCACGTGCCACCGTGGCAGTTACCAGAACCAATAACAACACTACCAAACGATGACTTACTGGCTTCATTAAGACGATACCTCCTTTCCACCTCCTCCGAAGACGCCGACTTCTCTGGCGACTTCGACTTCCCGGCGGAAGACGATGACGAGTTCTTCATGTACGAGTTCAAGGTCAGGAAGTGCACCCGGGCCCGGGCCCACGACTGGACCGAGTGCCCGTTTGCTCATCCGGGCGAGAAGGCCCGAAGGCGCGACCCGAGGAAGTACAGTTATTCGGGTACTGCGTGCTCTGATTTCCGTAAGGGCGGTTGTAAGAAGGGCGACGGCTGTGAGTTCGCTCATGGTGTTTTTGAGTGTTGGCTTCACCCCTCTCGGTACCGGACCCAGGCTTGTAAGGACGGGCCCGGGTGCAAGCGCCGGGTTTGTTTCTTCGCCCACTCCCCTGACCAGATTCGGGCCGGGTCGGGCCTCGTCGGGAGCCCGAGGAGCGACAGCTCCGACGGGGTCGGGTCCGTGGGGGAGCTCGTGGCCTCGCTGAGGAACCTGCAGCTAAATAAGGTCAAGTCCATGCCGACGAGCTCCGTGTGGGGCGTTGGTTCACCGGTCTTCGGGTCTCCGAGAGGCGGGTCCGTCAGTCGGGCCGGGTTCCTCAGCCTGCCCACGACCCCGACCCGTCCCGGTATCGGGTTATTGGACTGGGGGGATAATAATAATAACAATAAGAAGGGTGAGGAGGAGGAGGGGGGTGTGGTTATGGAGAGGGTGGAATCGGGCCGGGAGCTCCGGGCCAAGATGTTCGAGAAGCTGAGCAAGGAGAACCCGCTGAATGGGCCCAGCCGGGTTGCGGGGTTAGGCCCGGCGCAGGGGCCTGATCTTGGGTGGGTGTCTGATCTCATAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158481.p1 GENE.R_Transcript_158481~~R_Transcript_158481.p1 ORF type:5prime_partial len:329 (+),score=-6.37 R_Transcript_158481:2-988(+)
SDTTTLQFQNKFPKQKMMIGETHRHHQSHVPPWQLPEPITTLPNDDLLASLRRYLLSTSSEDADFSGDFDFPAEDDDEFFMYEFKVRKCTRARAHDWTECPFAHPGEKARRRDPRKYSYSGTACSDFRKGGCKKGDGCEFAHGVFECWLHPSRYRTQACKDGPGCKRRVCFFAHSPDQIRAGSGLVGSPRSDSSDGVGSVGELVASLRNLQLNKVKSMPTSSVWGVGSPVFGSPRGGSVSRAGFLSLPTTPTRPGIGLLDWGDNNNNNKKGEEEEGGVVMERVESGRELRAKMFEKLSKENPLNGPSRVAGLGPAQGPDLGWVSDLIT*

Click here to download the sequence:
Link to NCBI Protein BLAST