Transcript Information: R_Transcript_158821.p1


Annotated TAIR IDAT1G80880.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30395194-30396921 | Reverse length=540
E-Value1.2E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6289827854326
Replicate 20.57655744850246
Replicate 31.2580359320541
Condition 2: 8 Hour
Replicate 10.95253936865714
Replicate 21.4327338479478
Replicate 32.7414331829417
Condition 3: 24 Hour
Replicate 11.9963310632786
Replicate 21.7159697992669
Replicate 32.3540551951583


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158821.p1 GENE.R_Transcript_158821~~R_Transcript_158821.p1 ORF type:complete len:437 (+),score=86.58,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|7.6e-07,PPR_2|PF13041.2|8.3e-07,PPR_2|PF13041.2|9.7e-08,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|15,PPR|PF01535.16|18,PPR|PF01535.16|0.1,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|0.0054,PPR|PF01535.16|0.0053,PPR|PF01535.16|8.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00049,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|27,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|18,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|2,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|3.4 R_Transcript_158821:316-1626(+)
ATGCCAAACAGCTTTTTTTTGGCTATATGGGCATTAAGAAAAGAATGGGAATTGGCGTTGTTGGGTTTTCATTGGAGTGAAAAATGGGGTCTTGTTGATGACAAATGCTTGAGTTTGATTGTTTGGGTGTTGGGTACTCATCATAAATTTGACATTGCTTGGTCTTTGATTCGTGATTTACACAAGTTGGTGGATACTAGGCAAGCAATGCTGGCCATCATAGAGAGATATGCAGCATCAAATTCTCATGAGAAGGCAATAAAAACTTTTCATTTTATGGAGAAGCTTACAATAAATCCAGACCAGAACGCATTTTACTCTGTATTGAGTGCTTTGTGTAGATATGGGAATGTTGAAGAAGCTGAAGAATTCATGCTGAAAAATAAGAAGCTTTACCCTTTAGAAACTGAGGGCTTCAACATCATTCTTCATGGCTGGTGTGACATTTCTGTTGATATATTTGAAGCCAAGAGAGTCTGGAGGGACATGGCAGGTTACTGTATCACACCTGATACAAGGTCTTACACACATATGATCTCCTGTTTCTCGAGGGTTGGAAACCTTTTTGATTCTCTAAGGCTGTATGATGAGATGAGGAAACGGGGATGGGTCCCTGGTCTTGAGGTATACAATTCATTGATATATGTGATGACTTGTGAAAATTGCTTGAGTGAAGCTGTCAAAATGCTAGACAAAATCAAAGAGATGGGGTTGCAGCCAGCTTCTCAGACCTTTAATAGCTTGATATGTCCTTTATGTGAATCTGGGAAGTTTGAGGAGGCAAGGAGACTGTTAGCACTGATGACACAGGAGGGTAATAGGCCAACTGTTGAGACATATCACGCATTCTTGAAAGGTGCAGATTTAGAAAGCACCTTGGAATTTCTGAACCTGATGAAGAAAGATAAAGTTGGCCCTGATAGTTGTACATTTCTTTTAATTTTTGATAGGTTCTTCGAATTAAGACAACCTGAAAATGCATTAAAAGTTTGGGTGGAAATGAGAGATCTTGGTGTGTATCCAGAATCAGCACATTACTTGTCACTTATACGTGGCTTAGCAAATTGTGGCTGCCTGATCAAGGCCAGAGAACTGCACACTGAGATGATTTCATATGGACTTGTGGATGATCCAAAACTCAAGAAACTGCTCCAAGCCCCGCAAGAAAGTAGTTGCCGTGGAAGGATTGAGCATGTGAAAACTGTGAGATTTGTTAATAAATTGGAATCCCCATTTACTTCACATATTAAGCCATGTAGAGGGAGGAGAAACCGAGGTGGTAAAAGGGAAAGGGAAGAAGCAAAAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158821.p1 GENE.R_Transcript_158821~~R_Transcript_158821.p1 ORF type:complete len:437 (+),score=86.58,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|7.6e-07,PPR_2|PF13041.2|8.3e-07,PPR_2|PF13041.2|9.7e-08,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|15,PPR|PF01535.16|18,PPR|PF01535.16|0.1,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|0.0054,PPR|PF01535.16|0.0053,PPR|PF01535.16|8.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00049,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|27,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|18,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|2,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|3.4 R_Transcript_158821:316-1626(+)
MPNSFFLAIWALRKEWELALLGFHWSEKWGLVDDKCLSLIVWVLGTHHKFDIAWSLIRDLHKLVDTRQAMLAIIERYAASNSHEKAIKTFHFMEKLTINPDQNAFYSVLSALCRYGNVEEAEEFMLKNKKLYPLETEGFNIILHGWCDISVDIFEAKRVWRDMAGYCITPDTRSYTHMISCFSRVGNLFDSLRLYDEMRKRGWVPGLEVYNSLIYVMTCENCLSEAVKMLDKIKEMGLQPASQTFNSLICPLCESGKFEEARRLLALMTQEGNRPTVETYHAFLKGADLESTLEFLNLMKKDKVGPDSCTFLLIFDRFFELRQPENALKVWVEMRDLGVYPESAHYLSLIRGLANCGCLIKARELHTEMISYGLVDDPKLKKLLQAPQESSCRGRIEHVKTVRFVNKLESPFTSHIKPCRGRRNRGGKREREEAKG*

Click here to download the sequence:
Link to NCBI Protein BLAST