Transcript Information: R_Transcript_158831.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value2.2E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96309592977159
Replicate 21.0550904731808
Replicate 30.80576463906064
Condition 2: 8 Hour
Replicate 10.67674501110477
Replicate 20.56183120203984
Replicate 30.63849886604376
Condition 3: 24 Hour
Replicate 10.86524399099387
Replicate 21.2745501368927
Replicate 30.49494809593486


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158831.p1 GENE.R_Transcript_158831~~R_Transcript_158831.p1 ORF type:complete len:398 (+),score=30.31,AMP-binding|PF00501.24|2.5e-64,AMP-binding_C|PF13193.2|2.3e+03,AMP-binding_C|PF13193.2|1.8e-21 R_Transcript_158831:97-1290(+)
ATGATCCAAGAAGGTGATCCAAACTTTGACTGGATCCGACCTGAGAGTGAGTGGGACCCAATTGTCATCAACTACACATCAGGCACAACATCAGCCCCAAAAGGAGTTGTTCATTGTCACCGAGGGTCTTTTATTATGTCCCTAGATTCATTGATCAATTGGGCTGTCCCAAAACATCTTGTTTATCTATGGACCCTACCAATGTTCCATGGTAATGGCTGGAGCTTCACATGGGGGATGGCCGCGGTCGGGGCAACCAACATTTGCCTCCGTAAATTTGACGGTGCCACAATCTACACCTTAATCCAACGCCACCGTGTCACCCACTTGTGTGGCGCCCCAACTATCCTCAACATGCTTACGAACCTCGTCCCAAACCCTACGCCCTTGGCCCGACCAGTGCACTTTCTTACAGGTGGCTCATCCCCACCAGCCACCATTCTCTTGCGAGCAGAATATCTTGAATTCATAGTCACTCACGGATATGGGATGACTGAAACCGGCGGATGCGCCCTCACCTGCGCTTGGAAACCATGTTGGGATCGTTTCCCTGCAACGGAGCGGGCGCGATTGAAAGCCCGACAGGGTGTCCGCTCCGTTGGTATGACACAGGCAGACGTAATCAATCCGACCACCGGAAAACCCGTCAAAAACGATGGAAAATCTATAGGAGAAATTGTCCTACAAGGACCGTGCATAATGCTAGGGTACTTGAAAAACCCAGAAGCTACATTGAAATGTATGGGACAAGATGGGTGGCTGAGAACAGGGGACTTAGCCGTAATGCACCCTGATGGGTATATAGAAATCAAGGATCGTTCAAAGGATATTATCATCAGTGGTGGAGAGAATATTAGTAGTGTTGAGGTCGAATCTGTGCTCTTTACATTTCCAGGGTTGAAGGAGGCCGCGGTTGTGGCTCGCCCCCACGAGTACTGGGGCCAGACACCCTGTGCTTTTGTTTGCTTGAACCCTGAAATTGTAACTTCAAAGAGCAAGGAAGAAATCGAGAAGCAAATTATCAAGCATTGTAGGGAGAACATGGCACACTATATGGTGCCTAAGACAGTTGTTGTAATGGAGGCGTTGCCCAAGACTTCTACTGGGAAGATTCAGAAGGTTGTACTTAGAGAGAGGGCCAAATCGTTGAATGTTGATAGTACTGCAACTGAGTCAGTCAAGAGTCGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158831.p1 GENE.R_Transcript_158831~~R_Transcript_158831.p1 ORF type:complete len:398 (+),score=30.31,AMP-binding|PF00501.24|2.5e-64,AMP-binding_C|PF13193.2|2.3e+03,AMP-binding_C|PF13193.2|1.8e-21 R_Transcript_158831:97-1290(+)
MIQEGDPNFDWIRPESEWDPIVINYTSGTTSAPKGVVHCHRGSFIMSLDSLINWAVPKHLVYLWTLPMFHGNGWSFTWGMAAVGATNICLRKFDGATIYTLIQRHRVTHLCGAPTILNMLTNLVPNPTPLARPVHFLTGGSSPPATILLRAEYLEFIVTHGYGMTETGGCALTCAWKPCWDRFPATERARLKARQGVRSVGMTQADVINPTTGKPVKNDGKSIGEIVLQGPCIMLGYLKNPEATLKCMGQDGWLRTGDLAVMHPDGYIEIKDRSKDIIISGGENISSVEVESVLFTFPGLKEAAVVARPHEYWGQTPCAFVCLNPEIVTSKSKEEIEKQIIKHCRENMAHYMVPKTVVVMEALPKTSTGKIQKVVLRERAKSLNVDSTATESVKSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST