Transcript Information: R_Transcript_158833.p1


Annotated TAIR IDAT1G21530.2
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7545151-7546936 | Reverse length=549
E-Value1.7E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56686214145089
Replicate 20.52164721531175
Replicate 30.14227787326803
Condition 2: 8 Hour
Replicate 10
Replicate 20.13888746485208
Replicate 30.33822876932398
Condition 3: 24 Hour
Replicate 10.42778522784542
Replicate 20.13698918565576
Replicate 30.13594847631613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158833.p1 GENE.R_Transcript_158833~~R_Transcript_158833.p1 ORF type:3prime_partial len:161 (+),score=11.07,AMP-binding|PF00501.24|2.9e-25 R_Transcript_158833:1352-1831(+)
ATGACTCATGTAGATGTAATTGATCAAAATACGGGGAAACCCGTTCAGAATGACGGGAAATCTATAGGAGAAATTGTGCTACGAGGGCCGTGCATTATGTTGGGGTACTTGAAAGACCCTGAAGCCACGGCTAAATGCATGGGAAGTGATGGGTGGCTAAGAACAGGGGACCTAGCCGTGAGGCACCCTGATGGGTATTTAGAAATCAAGGATCGGTCAAAGGATATTACTATTATTAGTGGTGGAGAGAACATTAGTAGTGTCGAGGTTGAATCCGTGCTCTACACATTTCCGGGGTTGAAGGAGGCCGCAGTTGTGGTTCGCCCCAATGAGTGCTTTTTGTCCTTCAACCCCGAAATTGTGACTTCAAAAACTTATTTGCTTGCTAGTTGTAGTTATAAATGTTATCTTTACTTAATTATTGTAGCTTATACCCTACCTAGCTGCTGTATAGGGTATGATTTTCTCATGATAACGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158833.p1 GENE.R_Transcript_158833~~R_Transcript_158833.p1 ORF type:3prime_partial len:161 (+),score=11.07,AMP-binding|PF00501.24|2.9e-25 R_Transcript_158833:1352-1831(+)
MTHVDVIDQNTGKPVQNDGKSIGEIVLRGPCIMLGYLKDPEATAKCMGSDGWLRTGDLAVRHPDGYLEIKDRSKDITIISGGENISSVEVESVLYTFPGLKEAAVVVRPNECFLSFNPEIVTSKTYLLASCSYKCYLYLIIVAYTLPSCCIGYDFLMITL

Click here to download the sequence:
Link to NCBI Protein BLAST