Transcript Information: R_Transcript_158833.p2


Annotated TAIR IDAT1G75960.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28518187-28519821 | Forward length=544
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.58868132008312
Replicate 30.21408165977713
Condition 2: 8 Hour
Replicate 10.22883985932005
Replicate 20.20898020412323
Replicate 30.50892366225384
Condition 3: 24 Hour
Replicate 10.64367683815993
Replicate 20.61837174459563
Replicate 30.20455798772801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158833.p2 GENE.R_Transcript_158833~~R_Transcript_158833.p2 ORF type:complete len:107 (+),score=-1.66,AMP-binding|PF00501.24|7.3e-13 R_Transcript_158833:1003-1323(+)
ATGGCCGCGGTTGGAGGAACAAACATCTGCCTCCGTGAATACGATGGTGCCACAGTCTACGCTGCAATCCAACAACACCGTGTAACCCACATGGTCGGCGCCCCTGTTGTCCTCACCATGCTTACAAACCTCAACCCAAACCCGAGCCCCCTAGCTCCACCCGTGCACTTTCTCACGGGTGGGGCATCGCCTCCAGCCACCCTGCTCGTACGAGCAGAGTGTCTTGGATTCATAATGAGTCACAGCTACGGGATGACAGAAACCGGAGGTCCTGTCATCACCTGTGCATCAAAACAGACATGGGATCCCGGGCCCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158833.p2 GENE.R_Transcript_158833~~R_Transcript_158833.p2 ORF type:complete len:107 (+),score=-1.66,AMP-binding|PF00501.24|7.3e-13 R_Transcript_158833:1003-1323(+)
MAAVGGTNICLREYDGATVYAAIQQHRVTHMVGAPVVLTMLTNLNPNPSPLAPPVHFLTGGASPPATLLVRAECLGFIMSHSYGMTETGGPVITCASKQTWDPGPI*

Click here to download the sequence:
Link to NCBI Protein BLAST