Transcript Information: R_Transcript_158834.p3


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value9.6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85294210068779
Replicate 20.58868132008312
Replicate 30.8563266391085
Condition 2: 8 Hour
Replicate 10
Replicate 20.41796040824646
Replicate 30.16964122075128
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.40911597545603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158834.p3 GENE.R_Transcript_158834~~R_Transcript_158834.p3 ORF type:complete len:107 (+),score=6.91,AMP-binding|PF00501.24|1.1e-09 R_Transcript_158834:97-417(+)
ATGATCCAAGAAGGTGATCCAAACTTTGACTGGATCCGACCTGAGAGTGAGTGGGACCCAATTGTCATCAACTACACATCAGGCACAACATCAGCCCCAAAAGGAGTTGTTCATTGTCACCGAGGGTCTTTTATTATGTCCCTAGATTCGTTGATCAATTGGGCTTCCCAAAACATCCTGTTTATCTATGGACATTACCGATGTTCCACGGTAATGGCTGGACCTTCACACGGGGGATGGCAGCAGTCGGAGGAACAAACATCTGCCTCGGTGAATACGATGGTGCCACAGTCTACGCAGCAATCCAACACCACCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158834.p3 GENE.R_Transcript_158834~~R_Transcript_158834.p3 ORF type:complete len:107 (+),score=6.91,AMP-binding|PF00501.24|1.1e-09 R_Transcript_158834:97-417(+)
MIQEGDPNFDWIRPESEWDPIVINYTSGTTSAPKGVVHCHRGSFIMSLDSLINWASQNILFIYGHYRCSTVMAGPSHGGWQQSEEQTSASVNTMVPQSTQQSNTTV*

Click here to download the sequence:
Link to NCBI Protein BLAST