Transcript Information: R_Transcript_158884.p1


Annotated TAIR IDAT1G57820.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)VIM1, ORTH2
Annotation TypeOrtholog
Chromosome Positionchr1:21414342-21417902 | Reverse length=645
E-Value3.3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2598904039176
Replicate 20.59989429760852
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 10.93279485513315
Replicate 20.85184311775945
Replicate 31.9015973030882
Condition 3: 24 Hour
Replicate 11.3118746987259
Replicate 21.6804006773773
Replicate 32.084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158884.p1 GENE.R_Transcript_158884~~R_Transcript_158884.p1 ORF type:5prime_partial len:105 (+),score=23.71 R_Transcript_158884:2-316(+)
CCAAAAGTTCCAGAGCTTAAATTTGCTATGGAGTTGACAGAAAGACAGGAAAGTCCTCACTGGGACTTTGATGAAAAAGAAGGCTGTTGGAAATGGATGAAGCCTCCACCTACTAGTGGGGCAATTAAGGGAGGAAAAGGAAAAGGAGCTTCTCATCCTAGGAAAAACTCGAAAGCTAAAATTTTGAAGGGTATCTATGGCTCATGTGCTTGCATTGATTTTTCTTTGCTTCAGTCAATAACCAGTGAATTTACGATTAACATGATAAAATATAAGTCTGAATCTGTTTTCTGTAGCTTTTGTGATGACCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158884.p1 GENE.R_Transcript_158884~~R_Transcript_158884.p1 ORF type:5prime_partial len:105 (+),score=23.71 R_Transcript_158884:2-316(+)
PKVPELKFAMELTERQESPHWDFDEKEGCWKWMKPPPTSGAIKGGKGKGASHPRKNSKAKILKGIYGSCACIDFSLLQSITSEFTINMIKYKSESVFCSFCDDL*

Click here to download the sequence:
Link to NCBI Protein BLAST