Transcript Information: R_Transcript_158913.p1


Annotated TAIR IDAT1G24510.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8685504-8688101 | Reverse length=535
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1236.94795209502
Replicate 2208.1610828586
Replicate 3227.4006543827
Condition 2: 8 Hour
Replicate 1180.99439724064
Replicate 2184.64414744233
Replicate 3214.7376174326
Condition 3: 24 Hour
Replicate 1264.27177349801
Replicate 2250.17905607222
Replicate 3261.91742138388


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158913.p1 GENE.R_Transcript_158913~~R_Transcript_158913.p1 ORF type:complete len:536 (+),score=143.23,Cpn60_TCP1|PF00118.20|2.1e-159 R_Transcript_158913:195-1802(+)
ATGGCGTTGGCGTTCGACGAGTTCGGACGGCCGTTCATAATACTGAAGGAGCAAGAGCAGAAGACTCGATTGAGAGGCTTAGAAGCTCAAAAGGCCAACATTTCCGCCGGCAAAGCTGTTGCTCGTATCCTCCGCTCTTCTCTTGGCCCTAAGGGCATGGACAAGATGCTCCAGAGCCCCGACGGTGACGTCATTATCACAAATGATGGTGCTACTATCTTGGAGCAGATGGATGTTGACAACCAAATCGCAAAGTTGATGGTTGAATTGTCTCGTAGTCAGGACTATGAAATTGGTGATGGCACTACTGGAGTTGTTGTCATGGCTGGCTCCCTACTTGAACAGGCTGAGACACTCTTAGAACGTGGAATTCATCCTATAAGAATTGCAGAGGGATATGAAGTTGCCTCCCGGATTGCAGTTGAACAGTTGGAGAAGATTGCACATAAGTTTGAATTTAGTGAAGCGGATGCAGAACCTTTGATACAGACTTGCATGACTACTTTGTCATCCAAGATTGTAAACCGCTGTAAGCGTAGTTTGGCTGAGATTGCTGTTAAAGCAGTTCTCGCCGTTGCAGACTTGGAGCGGAAGGATGTTAATCTAGATCTAATTAAGGTGGAGGGAAAAGTTGGAGGTAAATTGGAAGATACTGAACTTATTTATGGAATTGTGGTTGACAAGGACATGAGCCACCCCCAGATGCCGAAGAAAATTGAAGATGCCAAGATAGCAATTTTGACTTGCCCTTTTGAGCCACCTAAGCCAAAGACCAAGCATAAGGTTGAGATTGATACTGTGGAAAAGTTTGAGACATTGCGTAAACAAGAGCAACAATACTTTGATGATATGGTTCAAAAGTGCAAGGATGTTGGAGCAACCTTGGTTATCTGTCAGTGGGGATTTGATGATGAGGCAAATCATTTGTTAATGCATAGGAATTTACCTGCTGTCAGATGGGTTGGTGGTGTGGAGTTGGAGCTTATTGCAATTGCAACAGGTGGAAGAATCGTACCAAGGTTTCAGGAACTCACCGCTGACAAGTTGGGCAAGGCTGGCTTGGTTCGTGAAAAATCTTTTGGCACAACAAAAGATCGAATGTTGTATATTGAACATTGTGCAAATTCCAGGGCAGTCACCATATTTATCCGTGGTGGTAACAAGATGATGATTGAGGAGACCAAGAGAAGTATCCATGATGCACTTTGTGTTGCAAGAAATCTGATCCGCAACAATTCTATTGTGTATGGTGGGGGTGCTGCTGAAATTGCTTGCTCACTTGCTGTAGAGGCTGCTGCTGATCGTTTCCCAGGAGTTGAGCAGTATGCCATTAGAGCCTTTGCTGATGCTTTGGACGCAGTTCCCATGGCACTTGCAGAAAACAGTGGTTTTCAGCCTATTGAAACACTGTCTGCTGTGAAATCGCAGCAAGTGAAGGAGAACAATCCTTGCTGTGGCATAGACTGCAACGATGTTGGCACAAATGACATGCGTGAGCAAAATGTGTTCGAGACTTTGATTGGAAAGCAGCAACAGCTTTTACTGGCCACGCAGGTCGTGAAGATGATTTTGAAGATAGACGATGTCATTAGCCCTTCAGAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158913.p1 GENE.R_Transcript_158913~~R_Transcript_158913.p1 ORF type:complete len:536 (+),score=143.23,Cpn60_TCP1|PF00118.20|2.1e-159 R_Transcript_158913:195-1802(+)
MALAFDEFGRPFIILKEQEQKTRLRGLEAQKANISAGKAVARILRSSLGPKGMDKMLQSPDGDVIITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAETLLERGIHPIRIAEGYEVASRIAVEQLEKIAHKFEFSEADAEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKKIEDAKIAILTCPFEPPKPKTKHKVEIDTVEKFETLRKQEQQYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTADKLGKAGLVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSLAVEAAADRFPGVEQYAIRAFADALDAVPMALAENSGFQPIETLSAVKSQQVKENNPCCGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY*

Click here to download the sequence:
Link to NCBI Protein BLAST