Transcript Information: R_Transcript_158957.p1


Annotated TAIR IDAT1G65020.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:24154523-24156511 | Reverse length=319
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9311324160862
Replicate 20.91954600363349
Replicate 31.5048221778494
Condition 2: 8 Hour
Replicate 12.1447472946492
Replicate 22.2850536188073
Replicate 32.6498701635601
Condition 3: 24 Hour
Replicate 12.346053293342
Replicate 21.9318474940652
Replicate 32.236699749026


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_158957.p1 GENE.R_Transcript_158957~~R_Transcript_158957.p1 ORF type:internal len:137 (-),score=26.21 R_Transcript_158957:1-408(-)
CTTCCGGAAGAGCAACTCCTCTTTGTTCAAGATATGCTTCTAAAACAGCAGCTTGACATCGGGCTTCTGCTACAGGATGGATATTTATCTTACAAAGTTATAACTTCCAACCCAAAGTTTCGATCACTAAATCCAGATCACTTCCCACCAGAAGTTATACAATATGATCAGTGGGTGCAGATAAAACCAGAATCAAAAAGCATGCTTTCTGGATGGATCAAAGGGGCCTTTCGCACTGTAAAGAAAGATATGCAGGATTCTATACAGCAACAGCTTCATTTTGTTCTTAGTACAGCTCCAATGTGGGATAGGCTGGAGCTCAAAGGCAGCAAATTTGTTCTAGGAGAATTCATGGAGTTTAAAGGAAAGCACGATGATGTGCAAGCTTTACAACATATTAAAAGATCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_158957.p1 GENE.R_Transcript_158957~~R_Transcript_158957.p1 ORF type:internal len:137 (-),score=26.21 R_Transcript_158957:1-408(-)
LPEEQLLFVQDMLLKQQLDIGLLLQDGYLSYKVITSNPKFRSLNPDHFPPEVIQYDQWVQIKPESKSMLSGWIKGAFRTVKKDMQDSIQQQLHFVLSTAPMWDRLELKGSKFVLGEFMEFKGKHDDVQALQHIKRS

Click here to download the sequence:
Link to NCBI Protein BLAST