Transcript Information: R_Transcript_159012.p1


Annotated TAIR IDAT3G50610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18779723-18780412 | Reverse length=229
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.11204697913819
Condition 3: 24 Hour
Replicate 10
Replicate 20.81686144039175
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_159012.p1 GENE.R_Transcript_159012~~R_Transcript_159012.p1 ORF type:5prime_partial len:162 (+),score=27.23 R_Transcript_159012:3-488(+)
CACTCAATTTCAGCAACTCCAAACCCATTTTTCAGTGATTTCACAGAGGTAGAAAAGAATGATTTTCGACCTACATCACCTGGTAGCAGTCCTGGTGCTGGTCATCTTGAAGCAAAGGAAAATGATTCGGAGACAATAGGACATTGCACAAGTGAAAAATGCACAGATGGTTTCCGGCCAACGGCACCAGGTGATAGCCCAGGAGCAGGACATAGGTCACGCGGTATTACATCAAAACACAGAAGGAATTATAACGTGGCGGCGCATCCTCATGCAGAACAGACAGATGGTTTCCGACCAACAGCACCAGGTGACAGCCCTGGAGCAGGACATTTTGTTGTAAGCAAGTCGCACAGCATTACATCAAGCCAAGAAAGCCAACATATCGAGGTCACACATCCTCATGCAGCACAAACAGATGATTACCGACCTACTACACCAGGTCACAGCCCAGGTGCTGGCCACATTGCTTCAAACAAAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_159012.p1 GENE.R_Transcript_159012~~R_Transcript_159012.p1 ORF type:5prime_partial len:162 (+),score=27.23 R_Transcript_159012:3-488(+)
HSISATPNPFFSDFTEVEKNDFRPTSPGSSPGAGHLEAKENDSETIGHCTSEKCTDGFRPTAPGDSPGAGHRSRGITSKHRRNYNVAAHPHAEQTDGFRPTAPGDSPGAGHFVVSKSHSITSSQESQHIEVTHPHAAQTDDYRPTTPGHSPGAGHIASNKN*

Click here to download the sequence:
Link to NCBI Protein BLAST