Transcript Information: R_Transcript_15909.p1


Annotated TAIR IDAT3G17590.2
Annotated Gene Nametranscription regulatory protein SNF5, putative (BSH)
Annotated Gene Symbol(s)BSH
Annotation TypeOrtholog
Chromosome Positionchr3:6017313-6019591 | Reverse length=242
E-Value5.2E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71023194376337
Replicate 20.98037200387384
Replicate 30.7130501975456
Condition 2: 8 Hour
Replicate 12.3818934773585
Replicate 21.3921171574279
Replicate 30.42377301059269
Condition 3: 24 Hour
Replicate 11.3399498381929
Replicate 21.8021806875569
Replicate 31.1071601592594


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15909.p1 GENE.R_Transcript_15909~~R_Transcript_15909.p1 ORF type:complete len:257 (+),score=45.11,SNF5|PF04855.8|1.6e-17,SNF5|PF04855.8|4.3e-11,SNF5|PF04855.8|0.019 R_Transcript_15909:101-871(+)
ATGAAGCCCCACCTTTCAGCGGCCTCCAGGACCCCTGTTAAGTTCAGAATGCCAACTGCAGATAACCTTGTGCCCATTCGATTGGACATTGAAATCGATGGTCAGAGATACAAAGATGCATTTACTTGGAACCCTTCAGATCCTGATTCAGAGGTTGCAGTCTTTGCAAAAAGAACTGTGAAGGACTTGAAACTTCCACCAGGATTTGTAACTCAGATTGCACAATCTATTCAATCGCAGTTAACTGAATTCCGATCATATGAAGGTCAAGATATGTTCGTTGGTGAAAAGATTGTTCCTATCAAGTTAGACCTCAGAGTAAATCATACTCTTATCAGGGACCAATTTTTGTGGGATCTCAACAACATGGAAAGTGACCCTGAGGAGTTTGCGAGAACTTTCTGTACCGACATGGATATTGAAGATCCTGAAGTTGCAACGAGAGGAAAGCGAGCTGGAGTGTGGGGGAGGAATCCAATTATGAAACCTGCAATTGCTTTTGCCATAAGAGAGCAACTTTATGAGATTGCAGTGCAAAATGTTACCTCAGCAAAGGAGATAAAAGTAAACAAGAAGGGTCGCCGAGGGATTGAGTATATCCCAGTCAGTAAAGCCGGTGTAACTGCAGTCGACTTGGTGAAATTGTTTGGTAGTAAATCAAGCGTCATCCGAAAGAGGAAAGACTGGGATGTATTTGAACCAATTGTTGATATTCTATCAAATGAAGAGGTAGAAGTACTTGAAGCAAGAGAAGATCGGATTGCTCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15909.p1 GENE.R_Transcript_15909~~R_Transcript_15909.p1 ORF type:complete len:257 (+),score=45.11,SNF5|PF04855.8|1.6e-17,SNF5|PF04855.8|4.3e-11,SNF5|PF04855.8|0.019 R_Transcript_15909:101-871(+)
MKPHLSAASRTPVKFRMPTADNLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVAVFAKRTVKDLKLPPGFVTQIAQSIQSQLTEFRSYEGQDMFVGEKIVPIKLDLRVNHTLIRDQFLWDLNNMESDPEEFARTFCTDMDIEDPEVATRGKRAGVWGRNPIMKPAIAFAIREQLYEIAVQNVTSAKEIKVNKKGRRGIEYIPVSKAGVTAVDLVKLFGSKSSVIRKRKDWDVFEPIVDILSNEEVEVLEAREDRIAR*

Click here to download the sequence:
Link to NCBI Protein BLAST