Transcript Information: R_Transcript_159107.p1


Annotated TAIR IDAT1G53440.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19945959-19951562 | Forward length=1035
E-Value7E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22775530603036
Replicate 20.074853120913719
Replicate 30.16332789729877
Condition 2: 8 Hour
Replicate 10.17458727235112
Replicate 20.039858969413878
Replicate 30.032355812157553
Condition 3: 24 Hour
Replicate 10.12276902260804
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_159107.p1 GENE.R_Transcript_159107~~R_Transcript_159107.p1 ORF type:complete len:561 (+),score=58.36,Malectin|PF11721.4|1.1e+04,Malectin|PF11721.4|1.6e-33,LRR_8|PF13855.2|0.0023,LRR_8|PF13855.2|7.7e-11,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|1.9e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|3.1e+03,LRR_4|PF12799.3|26,LRR_4|PF12799.3|11,LRR_4|PF12799.3|0.91,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.00069,LRR_4|PF12799.3|0.89,LRR_4|PF12799.3|0.036,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|21,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|15,LRR_1|PF00560.29|0.91,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.6e+02 R_Transcript_159107:79-1761(+)
ATGGTGTCGCACTACAGAGGAGTTTCTCATCCCGTGATCCTGTTGGCAATTTTTGTTAGCTGTTGTTTCTCTGAATTCGGAACTCACGCCCAACTCATCCCTGAAACCGAAGTCAATTCTCTGCAAATAATTGACAACAAATTGAAGATCAATGCATGGAAGAATATCAACCCAACGTCTTGCAATCCTACATATCGAAGCTTCAATCAACAATACTCTCCAGGAAGTTTCAGCAATGTTACCTGTGATTGTTCCTTCAGCCAAGGCACTATTTGCCATGTCACAAATATCCAGTTGAAGAAGCTTAATCTAATCGGAAATATTCCTGAAGAATTTGGACATCTTAGTCAACTGCAAGAAATTGATCTCTCCGTAAACTATTTGAATGGAGCAATCCCTAAAAGTTTGTCAAAGATCCCGCTTGTCACTTTGTCACTTTTCGCCAACCAGATCTCAGGTCCAATTCCTGATGAAATTGGACAGATTACTACCCTTGAGAAGCTGGTATTGTTAGATAACCAAATTTCAGGAGTGATACCAAGAAGTATGGGCAGTTTGAATAGTTTGAAAACATTGGTGCTTTCTGGAAACAACATTACTGGAACAATACCTGAAACGTTTGTCAATTTAAAGAACCTCACGGAACTGGAAATGCAAGGCACATCTATGGAGGGACCTATTCCGTCTAGCTTATCTCTATTGACGAGCTTGACAATTCTGAGAATATCAGATCTCAATACGACAAGTATCCATTTCCCCAATGTTTCGAGCATGAATGAACTACAGTATTTGGTGCTGCGGAATTGCTTCATTACTGATCAGATCCCTGAATATATCAGAACCTTAGAGAGCTTAAAGCTTATAGATCTAAGCTATAACCAGTTAAGCGGTCCCATTCCAGATTCAATAGGATCCTTGCACGATCTTGTATATTTGTTCCTGTCAAACAACTTACTTTCTGGTGCGTTACCAGTTTGGATATCGAAAGGCACACATCACTTTGATGTGTCCTATAACAACTTTTCTGGATCAATACCTGTTAGTTGCCAGCAGCAGTCGACAAATGTGAACCTTGTTGCAAGTTATTCATCTGGAGATCAGAGTAAACCAGAGACGCAATGGTGCTCTGTGAAAGACCTTCCTTGCCCCAGTCCCCAGTATGATTCTTTGTTTATCAACTGTGGTGGAGGAAAGCTAAGTTTTCAGGGGAATGACTATGAAGAGGATAGCTCCAATGGAGGGCCTTCGAGCTACTTTGCAAATGAACAAAGGTGGGCTTACACTAGTACAGGAATTTTCATGTACAACGAAAATGGCAAATTTCTGGCAGAAGATAATACCACCAATGCTACCAGCGTTTACCAAACAGCTCGTCTGTCACCTTTATCTCTTAAATACTATGGTCTTTGCCTGCTACAAGGCAGCTACACGGTGAAGCTGCACTTTGCTGAGATTATGTTTTCCGAACCAACTGTTGGCAGGCGAATCTTCGATGTGGCAATTCAGGGGAATTTGGTCTTGAAGGATTTCAATATTGCACAAGAAGCGCACAAGGCATTAGAAGGCCAATCATTAAGGAGTTTAACAATGTCAATGTTAATGACAACAAGCTTGAAATCTCTTTATACTGGGCTGGAAAAGGAACCGCGTCTGTATATGAAAAAAACGCATATGGGCCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_159107.p1 GENE.R_Transcript_159107~~R_Transcript_159107.p1 ORF type:complete len:561 (+),score=58.36,Malectin|PF11721.4|1.1e+04,Malectin|PF11721.4|1.6e-33,LRR_8|PF13855.2|0.0023,LRR_8|PF13855.2|7.7e-11,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|1.9e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|3.1e+03,LRR_4|PF12799.3|26,LRR_4|PF12799.3|11,LRR_4|PF12799.3|0.91,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.00069,LRR_4|PF12799.3|0.89,LRR_4|PF12799.3|0.036,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|21,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|15,LRR_1|PF00560.29|0.91,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|2.6e+02 R_Transcript_159107:79-1761(+)
MVSHYRGVSHPVILLAIFVSCCFSEFGTHAQLIPETEVNSLQIIDNKLKINAWKNINPTSCNPTYRSFNQQYSPGSFSNVTCDCSFSQGTICHVTNIQLKKLNLIGNIPEEFGHLSQLQEIDLSVNYLNGAIPKSLSKIPLVTLSLFANQISGPIPDEIGQITTLEKLVLLDNQISGVIPRSMGSLNSLKTLVLSGNNITGTIPETFVNLKNLTELEMQGTSMEGPIPSSLSLLTSLTILRISDLNTTSIHFPNVSSMNELQYLVLRNCFITDQIPEYIRTLESLKLIDLSYNQLSGPIPDSIGSLHDLVYLFLSNNLLSGALPVWISKGTHHFDVSYNNFSGSIPVSCQQQSTNVNLVASYSSGDQSKPETQWCSVKDLPCPSPQYDSLFINCGGGKLSFQGNDYEEDSSNGGPSSYFANEQRWAYTSTGIFMYNENGKFLAEDNTTNATSVYQTARLSPLSLKYYGLCLLQGSYTVKLHFAEIMFSEPTVGRRIFDVAIQGNLVLKDFNIAQEAHKALEGQSLRSLTMSMLMTTSLKSLYTGLEKEPRLYMKKTHMGL*

Click here to download the sequence:
Link to NCBI Protein BLAST