Transcript Information: R_Transcript_159109.p1


Annotated TAIR IDAT1G53440.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19945959-19951562 | Forward length=1035
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1639033807159
Replicate 20.29751842695159
Replicate 31.2519876823808
Condition 2: 8 Hour
Replicate 10.86741424408257
Replicate 20.54317931598022
Replicate 30.97372000291549
Condition 3: 24 Hour
Replicate 10.83651929169772
Replicate 20.62504782280988
Replicate 30.8418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_159109.p1 GENE.R_Transcript_159109~~R_Transcript_159109.p1 ORF type:complete len:988 (+),score=136.57,Pkinase|PF00069.21|1.6e-50,Pkinase_Tyr|PF07714.13|7.6e-49,Malectin|PF11721.4|4.2e-48,Malectin|PF11721.4|1e+04,LRR_8|PF13855.2|0.0047,LRR_8|PF13855.2|1.6e-10,LRR_8|PF13855.2|4.8e+03,LRR_8|PF13855.2|3.9e-09,LRR_4|PF12799.3|50,LRR_4|PF12799.3|29,LRR_4|PF12799.3|14,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.068,LRR_4|PF12799.3|1.2e+04,LRR_1|PF00560.29|9.3e+02,LRR_1|PF00560.29|41,LRR_1|PF00560.29|6.5e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|29,LRR_1|PF00560.29|1.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|5.1e+02,LRR_1|PF00560.29|1.1e+04 R_Transcript_159109:79-3042(+)
ATGGTGTCGCACTACAGAGGAGTTTCTCATCCCGTGATCCTGTTGGCAATTTTTGTTAGCTGTTGTTTCTCTGAATTCGGAACTCACGCCCAACTCATCCCTGAAACCGAAGTCAATTCTCTGCAAATAATTGACAACAAATTGAAGATCAATGCATGGAAGAATATCAACCCAACGTCTTGCAATCCTACATATCGAAGCTTCAATCAACAATACTCTCCAGGAAGTTTCAGCAATGTTACCTGTGATTGTTCCTTCAGCCAAGGCACTATTTGCCATGTCACAAATATCCAGTTGAAGAAGCTTAATCTAATCGGAAATATTCCTGAAGAATTTGGACATCTTAGTCAACTGCAAGAAATTGATCTCTCCGTAAACTATTTGAATGGAGCAATCCCTAAAAGTTTGTCAAAGATCCCGCTTGTCACTTTGTCACTTTTCGCCAACCAGATCTCAGGTCCAATTCCTGATGAAATTGGACAGATTACTACCCTTGAGAAGCTGGTATTGTTAGATAACCAAATTTCAGGAGTGATACCAAGAAGTATGGGCAGTTTGAATAGTTTGAAAACATTGGTGCTTTCTGGAAACAACATTACTGGAACAATACCTGAAACGTTTGTCAATTTAAAGAACCTCACGGAACTGGAAATGCAAGGCACATCTATGGAGGGACCTATTCCGTCTAGCTTATCTCTATTGACGAGCTTGACAATTCTGAGAATATCAGATCTCAATACGACAAGTATCCATTTCCCCAATGTTTCGAGCATGAATGAACTACAGTATTTGGTGCTGCGGAATTGCTTCATTACTGATCAGATCCCTGAATATATCAGAACCTTAGAGAGCTTAAAGCTTATAGATCTAAGCTATAACCAGTTAAGCGGTCCCATTCCAGATTCAATAGGATCCTTGCACGATCTTGTATATTTGTTCCTGTCAAACAACTTACTTTCTGGTGCGTTACCAGTTTGGATATCGAAAGGCACACATCACTTTGATGTGTCCTATAACAACTTTTCTGGATCAATACCTGTTAGTTGCCAGCAGCAGTCGACAAATGTGAACCTTGTTGCAAGTTATTCATCTGGAGATCAGAGTAAACCAGAGACGCAATGGTGCTCTGTGAAAGACCTTCCTTGCCCCAGTCCCCAGTATGATTCTTTGTTTATCAACTGTGGTGGAGGAAAGCTAAGTTTTCAGGGGAATGACTATGAAGAGGATAGCTCCAATGGAGGGCCTTCGAGCTACTTTGCAAATGAACAAAGGTGGGCTTACACTAGTACAGGAATTTTCATGTACAATGAAAGTGGCAAATTTCTGGCTGAAGACGATACCACCAATGCTACCGGCGTTTACCAAACAGCTCGTCTGTCACCTTTATCTCTTAAATACTATGGTCTTTGCCTGCTACAAGGCAGCTACACGGTGAAGCTGCACTTTGCTGAGATTATGTTTTCCGAACCAACTGTTGGCAGGCGAATCTTCGATGTGGCAATTCAGGGGAATTTGGTCTTGAAGGATTTCAATATTGCACAAGAAGCACAAGGCATTAGAAGGCCAATCATTAAGGAGTTTAACAATGTCAATGTTAATGACAACAAGCTTGAAATCTCTTTATACTGGGCTGGAAAAGGAACCACGTCTGTTTATGACAAAAACGCATATGGGCCTCTGATATCTGCGATTGCAGTGACTCCAAACTCCATCAAAAAGGGCAAGGGATGGCCAGTTGGAGCTATTGCTGGGATGGTGCTCGCTTCATGTGTTGCTACTGTATTTGTGGTGGTCATATTAATAAGAATGACAGGTAGCTTACGTGGAAAGGACCGTGGTGAAGAATTTCGAGGGCTGAATACAGGTTATTTCACCTTGAGGCAAATTAAAGATGCCACAAACAACTTTAACATACGAAACAAAATAGGTGAAGGGGGTTTTGGGCCTGTTTACAAGGGCGTACTATCCGATGGTAATGTTGTTGCTGTCAAGCAGCTCTCCTCCATGTCGAAGCAAGGGAATCGTGAATTTATAAATGAGATAGGCCTGATATCCGCTTTACAACACCCAAATCTTGTAAAGCTTCATGGATGTTGCATTGAAGGGAAAGAATTGTTGCTTGTTTATGAGTACATGGAAAACAATTCCCTTTTCCGTGTACTCTCTGACAAGAACATGTTGTTGGACTGGCGAATGAGAAAGAGTATATGCTTGGGGATCGCAAGGGGATTAGCCTACCTTCATGAGGAGTCGAGGCTGAAGATTGTACATAGGGACATGAAGCCAGCTAATGTGCTTCTTGATAAGGATATGACTGCTAAAATATCAGATTTTGGTTTGGCAAAGCTCGATGAAGAAGAAGATACTCATATCAGCACAAGAATCGCTGGAACTATTGGATATATGGCTCCCGAATACGCAATGAGGGGTTACCTCACCGATAAAGCAGATGTCTATAGCTTTGGAGTTGTCGTACTTGAGATTGTTAGTGGAAACAGCAACACAAAGTATCGGCCAAAGGACGAGTTTGTTTATCTGCTTGACTGGGCCTATGTCCTACAAGAGCAAGGAAACCTGTTGGAACTTGTGGATCCGAGTTTAGGCTCCAATTACTCTGAAGAAGAGGCACTCAGATTGCTCAACTTGGCACTGTTATGTACCAACCCATCTCCAACTCTTCGGCCGATAATGTCCTCGGTAGTGAGCATGATCAAGGGCCAACTTCCGATCCAAGCGCCAATCATAAAGCGAAGTGGGATGAACGAGGATTTGAGGTTCAAAGCCTTTGAGGGACTATCACAAGATAGCCAAAGTAACGTCTCAAGGAACTCGCAACTGAGTATATTGCAGAGAAGTATGTCTTGGACAGGTTCCTCTCTTTCAGTGAGAAGCAAGGATGAAGAGCTAGAGAGCTTACCCACAAGTAAATTGCTCCCCTATCCTATTGATGTCAATATTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_159109.p1 GENE.R_Transcript_159109~~R_Transcript_159109.p1 ORF type:complete len:988 (+),score=136.57,Pkinase|PF00069.21|1.6e-50,Pkinase_Tyr|PF07714.13|7.6e-49,Malectin|PF11721.4|4.2e-48,Malectin|PF11721.4|1e+04,LRR_8|PF13855.2|0.0047,LRR_8|PF13855.2|1.6e-10,LRR_8|PF13855.2|4.8e+03,LRR_8|PF13855.2|3.9e-09,LRR_4|PF12799.3|50,LRR_4|PF12799.3|29,LRR_4|PF12799.3|14,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.068,LRR_4|PF12799.3|1.2e+04,LRR_1|PF00560.29|9.3e+02,LRR_1|PF00560.29|41,LRR_1|PF00560.29|6.5e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|29,LRR_1|PF00560.29|1.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|5.1e+02,LRR_1|PF00560.29|1.1e+04 R_Transcript_159109:79-3042(+)
MVSHYRGVSHPVILLAIFVSCCFSEFGTHAQLIPETEVNSLQIIDNKLKINAWKNINPTSCNPTYRSFNQQYSPGSFSNVTCDCSFSQGTICHVTNIQLKKLNLIGNIPEEFGHLSQLQEIDLSVNYLNGAIPKSLSKIPLVTLSLFANQISGPIPDEIGQITTLEKLVLLDNQISGVIPRSMGSLNSLKTLVLSGNNITGTIPETFVNLKNLTELEMQGTSMEGPIPSSLSLLTSLTILRISDLNTTSIHFPNVSSMNELQYLVLRNCFITDQIPEYIRTLESLKLIDLSYNQLSGPIPDSIGSLHDLVYLFLSNNLLSGALPVWISKGTHHFDVSYNNFSGSIPVSCQQQSTNVNLVASYSSGDQSKPETQWCSVKDLPCPSPQYDSLFINCGGGKLSFQGNDYEEDSSNGGPSSYFANEQRWAYTSTGIFMYNESGKFLAEDDTTNATGVYQTARLSPLSLKYYGLCLLQGSYTVKLHFAEIMFSEPTVGRRIFDVAIQGNLVLKDFNIAQEAQGIRRPIIKEFNNVNVNDNKLEISLYWAGKGTTSVYDKNAYGPLISAIAVTPNSIKKGKGWPVGAIAGMVLASCVATVFVVVILIRMTGSLRGKDRGEEFRGLNTGYFTLRQIKDATNNFNIRNKIGEGGFGPVYKGVLSDGNVVAVKQLSSMSKQGNREFINEIGLISALQHPNLVKLHGCCIEGKELLLVYEYMENNSLFRVLSDKNMLLDWRMRKSICLGIARGLAYLHEESRLKIVHRDMKPANVLLDKDMTAKISDFGLAKLDEEEDTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLEIVSGNSNTKYRPKDEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSEEEALRLLNLALLCTNPSPTLRPIMSSVVSMIKGQLPIQAPIIKRSGMNEDLRFKAFEGLSQDSQSNVSRNSQLSILQRSMSWTGSSLSVRSKDEELESLPTSKLLPYPIDVNIK*

Click here to download the sequence:
Link to NCBI Protein BLAST