Transcript Information: R_Transcript_15918.p1


Annotated TAIR IDAT2G19930.1
Annotated Gene NameRNA-dependent RNA polymerase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8607533-8612441 | Reverse length=977
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6081434445374
Replicate 21.9734894771133
Replicate 33.1518960645869
Condition 2: 8 Hour
Replicate 13.677625064751
Replicate 22.1667521163939
Replicate 35.6284063939184
Condition 3: 24 Hour
Replicate 13.6483337067282
Replicate 22.7141646115342
Replicate 36.3202868185033


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15918.p1 GENE.R_Transcript_15918~~R_Transcript_15918.p1 ORF type:3prime_partial len:1032 (+),score=225.06,RdRP|PF05183.8|1.3e-120 R_Transcript_15918:209-3301(+)
ATGAGCGATCAACGGGGACGAACTTCAACTCAGCTACCGGCGCCGGTGGAAGACCTACTTCAGGCGATACACCGTGAGAAATCGACGCCGCTGGCCGACGAAGGTGCTCGGATAAAACTGGCGAAAATCGGCCAAGTAGAATCGGTGAGAATTCTTACAGATATTCGGAGTTGGGGTACGGTGAAGAATCTAAGCGCTTCGATTATGAGCAGGGCGAAGAAGTTGATGATGATGAAGAATTCTCGTTCTTCTTCTCTGACACCTCCACCACCTCTCTCTCCTAGTAGTACCAGTAGTCGTTCTTCTCTCTCTCCTCAACCTCGGGTTTTCACTTCGCCTGTTTCTGTCACCAGTAGTCCTCAACATGAAGGAAATTCGTCAACTCCAAATAAACGAAGGAAGACCTTAAACTTTTCTGATGAGATAGTTGAATCATTTTGGGAACATTTTACGGGCATGCCTACGGCTAGTACGAGTGAGCCAAATGATGATCATATGTCCATCCCTGATTGTCCTCTAGATGCCCTTGCTGAACTTGAGTTTAGAAAGGCTTTTCTTATTTTGAATTACATTGGAAGGGAGAAGCTGGAGGATGTTCTTACTGCTGAACAAATTCGAAGCTTTAAAAATTTTGAGAAAATGGATAGATTTGAGGCTGAAATTTGGAATGCATTTGGCCGAGAAAACTGCAAGGGAAATGAACGGAGGAAGTACCTTGACTGGGATTTAGGAAGGCATTACAACTATCAGTGTCATGTTTATGCAGATGGAAGCTGTAGTTTCAAGGGTCCATTTTTGAACAAGACTACCACCGTCTTACAAAAAGTAGTCAAGGATGAAAATGTACTGATTGTCAAGTTTGCAGAGGAAGAAACTGATGGACTAGATATAGACTCAGGTTCTGGCATTAACAAGGTTTTCGAAGAAGGAATATTTGTTGGTCGGAAGCGCTACCAGTTCTTTGTATTTAAAGATGGAGGAAAGGAGGAGAAGAAGAAGTGTCCTACTTCTAGTCCAGTAAAATGCTACTTTGTTTGTATGGAGGCATTTGCCAGCTTCTTTGCAAAGGGACCTCAGTTTTTTAAGAAAAGATCAATTCAGGAAGCAAGGTCGATATTTATGCACATACATAAAGCCGACAGTCTGTCCAAATACATGGCCAGGTTTTCCCTTATATTATCAAAAACTATTACATTGGAAGGTCTGGATGATGTGGTTGTTGAAGTTGTTCCTGATAAGCCTTGCCTGGATGAACATAAAAATCCGGTTTATGATAAAGAGAATAAGCTTTGCATACTTACTGATGGAACTGGATTTATCTCTGAAGATCTTGCTTTAAAATGTCCCCAAAATTGTTTTAAGGGCAGTGTTCCTGATGATAGCTACCTTCAGAGATCAGTAGATGCAGTCCCTTCATCACAACAACTTGCAACATTAAACCAACTGAAATTACACGCTTGTGAACCGCCACTCTTGATACAATTTCGCATGTTCCATCAAGGCCAAGCGATCAAGGGAACTGTTCTTGTTAACAAAACGCTTCCTGACAAAACAATTGTGGTTCGCGATTCAATGCTGAAGATTGAAACTGATGAAGAGCTGGAAGGTGCTCCTTCTGTGAATCGATTTGAGATTGTGGGGACTAGCAACAAACCAAAGCAACCTCGGCTATCGAAGAACTTGATCGCACTTCTTCATTATGGAGGTGTTCCAAAGGAATTTTTTCTGGCTTTACTGTCTAATGCTCTCAGAAAGACACAGTCTGTTCTGACTAAAAGACGAGCAGCGCTTAAAGTTGCCAGTAGCCGAGATGCTGATGATGACTTTACCATTTCGAGGATGATTTTATCTGGAATTCCCCTTGATGAACCTTTTCTCCAACACCGCTTGACTGTCATTGCCAAGGATGAAAAGAAGAATCTTAAAGCTGGAAAACTTCCTATTAGTGATAGTTTCTACGTAATGGGAACAGCTGATCCTACCGGCACTCTGAACAGTGGAGAAGTTTGTGTAATTCTAGAACATGGGCATATTTCTGGAAAAGTACTTGTGTACAGAAATCCTGGCATTCACCCTGGAGATATACATGTTGTGGAGGCCATTTATGTGGAGTCTTTGAAAAATTTTGTGGGCAATTCTAAATATGGCATATTCTTTCCATCAAAGGGATCAAGATCAATGGCAGATGAAATTGCTGGGGGTGATTATGATGGAGACATGTATTGGGTGTCTCAAAACCCTCAGCTTCTCGAGTACTTCATATCAAGTGAGGTCTGGGTTTGCAGTTCCTCTTCTCCCAGTGCAGCCAGCAAAGATCCTAGCAAGCTATCAGATCAGGAGTTGGAGCGGGAGCTTTTCCGCTTGTACTTGACTGCAAGGTTTCGGCCAAGCAAAGCAATGAGTCTTGCAGCTGATTGTTGGCTTGTCTTTATGGATCGACTCTTGACATTGGGAGATGACTGCTTAGAGGAAAAAGAGCGGCTGAAGCAAAAGATTTTTAAGCTGATTGATAAATATTATGATGCTCTTGATGCACCAAAGAAAGGGAAGAAGGTGGAAATTCCACAAGACTTGGTACCAGAAAAATATCCCCACCATATGGAGAGAGGCGAGCTTAACACTTACAAATCATCTTCCATTTTGGGCAAGATATATGATGAAGTGGATAGATTTAATGAGCATGATCCAATAAAAGTTTGGAAGCTGCCATGTTTCCGAGAACAAATAAAACAAATCCCAGAGGCACGCCTAGAAACATGGCAAGTATATTACAAGGAATACCGAGGTGACATGACAGCTGCCCTCAAAGGTGGTGACGAGTCTAAAAGCGACTCTGCAGCAGCAGTTTATCGAAAGTACAAGAAGATACTATATGGTATGGATAATGATGATAATGCTGATGATTTGGATAAGAGCCGTAGAGCATGGGAGGATCTTCGTATTGAGGCTCTAGCAGTTTATGATGCTGCTTACCAACATGCAGAAGAAGAAAGTGATCCTCAGAAACTCAATTTTGCTTGGAAGGTTGCTGGCTCTGCATTGTTGAAGATTTTTTTGGATGAGCAAGGCGAGAAGCCTATATGCTGTGTGCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15918.p1 GENE.R_Transcript_15918~~R_Transcript_15918.p1 ORF type:3prime_partial len:1032 (+),score=225.06,RdRP|PF05183.8|1.3e-120 R_Transcript_15918:209-3301(+)
MSDQRGRTSTQLPAPVEDLLQAIHREKSTPLADEGARIKLAKIGQVESVRILTDIRSWGTVKNLSASIMSRAKKLMMMKNSRSSSLTPPPPLSPSSTSSRSSLSPQPRVFTSPVSVTSSPQHEGNSSTPNKRRKTLNFSDEIVESFWEHFTGMPTASTSEPNDDHMSIPDCPLDALAELEFRKAFLILNYIGREKLEDVLTAEQIRSFKNFEKMDRFEAEIWNAFGRENCKGNERRKYLDWDLGRHYNYQCHVYADGSCSFKGPFLNKTTTVLQKVVKDENVLIVKFAEEETDGLDIDSGSGINKVFEEGIFVGRKRYQFFVFKDGGKEEKKKCPTSSPVKCYFVCMEAFASFFAKGPQFFKKRSIQEARSIFMHIHKADSLSKYMARFSLILSKTITLEGLDDVVVEVVPDKPCLDEHKNPVYDKENKLCILTDGTGFISEDLALKCPQNCFKGSVPDDSYLQRSVDAVPSSQQLATLNQLKLHACEPPLLIQFRMFHQGQAIKGTVLVNKTLPDKTIVVRDSMLKIETDEELEGAPSVNRFEIVGTSNKPKQPRLSKNLIALLHYGGVPKEFFLALLSNALRKTQSVLTKRRAALKVASSRDADDDFTISRMILSGIPLDEPFLQHRLTVIAKDEKKNLKAGKLPISDSFYVMGTADPTGTLNSGEVCVILEHGHISGKVLVYRNPGIHPGDIHVVEAIYVESLKNFVGNSKYGIFFPSKGSRSMADEIAGGDYDGDMYWVSQNPQLLEYFISSEVWVCSSSSPSAASKDPSKLSDQELERELFRLYLTARFRPSKAMSLAADCWLVFMDRLLTLGDDCLEEKERLKQKIFKLIDKYYDALDAPKKGKKVEIPQDLVPEKYPHHMERGELNTYKSSSILGKIYDEVDRFNEHDPIKVWKLPCFREQIKQIPEARLETWQVYYKEYRGDMTAALKGGDESKSDSAAAVYRKYKKILYGMDNDDNADDLDKSRRAWEDLRIEALAVYDAAYQHAEEESDPQKLNFAWKVAGSALLKIFLDEQGEKPICCVP

Click here to download the sequence:
Link to NCBI Protein BLAST