Transcript Information: R_Transcript_159337.p1


Annotated TAIR IDAT2G43290.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)MSS3
Annotation TypeHomolog
Chromosome Positionchr2:17991308-17991955 | Reverse length=215
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8650969967487
Replicate 27.3401700642343
Replicate 312.105186534552
Condition 2: 8 Hour
Replicate 19.5554594916079
Replicate 213.089296687523
Replicate 311.510777466587
Condition 3: 24 Hour
Replicate 113.438716425973
Replicate 29.862107633998
Replicate 311.566673208523


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_159337.p1 GENE.R_Transcript_159337~~R_Transcript_159337.p1 ORF type:5prime_partial len:123 (+),score=19.25,EF-hand_1|PF00036.28|7.7e+03,EF-hand_1|PF00036.28|5.2e-07,EF-hand_1|PF00036.28|0.0052,EF-hand_7|PF13499.2|6.3e-09,EF-hand_6|PF13405.2|1.1e+04,EF-hand_6|PF13405.2|2.4e-06,EF-hand_6|PF13405.2|0.64 R_Transcript_159337:1-369(+)
GGAAACACCACGGTCTGGTCTGGTAATGTGGACCTGACAGAAACGACATCTGGTGGTGCTTATTGCTGTCTTTCAGGGAGCTGGGGAGTCCTTCGGAAGGTTTTCCGAGCAGTTCCGAGACGCGGACAGAGTCCCCTAAGTGAAGACGAGCTGCGGAGGATTTTCATGGAGCAGGACAAGGATGGCGATGGTCATCTTAACAAGGACGATCTCAAGAAGGCTTTTCGTAAGCTTGGTTCCCGATTGCCTCGGTATCGAGCTGATCGAGCCATCCATTATACTGATATTGATGGAGATGGTTTCATTAACGAGCATGAGATTGATCATCTTGTTTCTTATGCTATTCATTATGGTTATAATCTCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_159337.p1 GENE.R_Transcript_159337~~R_Transcript_159337.p1 ORF type:5prime_partial len:123 (+),score=19.25,EF-hand_1|PF00036.28|7.7e+03,EF-hand_1|PF00036.28|5.2e-07,EF-hand_1|PF00036.28|0.0052,EF-hand_7|PF13499.2|6.3e-09,EF-hand_6|PF13405.2|1.1e+04,EF-hand_6|PF13405.2|2.4e-06,EF-hand_6|PF13405.2|0.64 R_Transcript_159337:1-369(+)
GNTTVWSGNVDLTETTSGGAYCCLSGSWGVLRKVFRAVPRRGQSPLSEDELRRIFMEQDKDGDGHLNKDDLKKAFRKLGSRLPRYRADRAIHYTDIDGDGFINEHEIDHLVSYAIHYGYNLK*

Click here to download the sequence:
Link to NCBI Protein BLAST