Transcript Information: R_Transcript_15943.p1


Annotated TAIR IDAT1G20510.1
Annotated Gene NameOPC-8:0 CoA ligase1
Annotated Gene Symbol(s)OPCL1
Annotation TypeOrtholog
Chromosome Positionchr1:7103645-7105856 | Reverse length=546
E-Value5.1E-276
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.17152489831
Replicate 219.606839359337
Replicate 318.90648011153
Condition 2: 8 Hour
Replicate 132.092686962106
Replicate 237.281837922712
Replicate 346.947272321479
Condition 3: 24 Hour
Replicate 123.295422039876
Replicate 220.595719699289
Replicate 326.152588320741


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15943.p1 GENE.R_Transcript_15943~~R_Transcript_15943.p1 ORF type:complete len:544 (+),score=69.00,AMP-binding|PF00501.24|3.3e-101,AMP-binding_C|PF13193.2|9.5e-17 R_Transcript_15943:175-1806(+)
ATGGCATCATCCATCGACCCTCGAAGCGGCTATTCCACCACAAACTCCACCTTCTACAGCAAACGCCCATCAATCCCACTCCCCCCAAACCCCTCCCTAGACATAAACACCTTCATCTCCGCCCGGCCCCACCACGGCACCACCGCCTTCATCGATGCTTCCACCGGCCAAACACTCTCCTACACCTCCCTCTGGTCACAAGTCAACTCTCTCTCACACTCTCTCTCCTCTCTAGGTGTCCGCAAGGGCCACGTCATCCTGATTCTCTCTCCAAACTCTCTCTCCTTCCCAGTCATCTGCCTCTCCGTCATGTCCCTTGGGGCCCTCATCACCACCACCAACCCTCTCAACACCCCCTCCGAAATCGCCAAGCAAGCCCGCGATTCCAAGCCTTTCCTCGCTTTCACCACCCGCGAACTCGCCCCCAAGCTCAGCGGCTCTCCCAACCTCCCCATCATTCTCATCGACGGCGATGATGGTCGGTTCGGTAAGTTGGTAGGAGTTGACCCGGGCGAGTTGGTCAGAGTGAGGGACAGAGTCGACCAAAACGACGCCGCGGCGTTGCTTTATTCGTCGGGGACCACCGGAGCGAGCAAAGGAGTGATTTCGTCGCATAGGAATATGATTGCGATGGTTCAGACGGTGATTAATAGGTTTCGTTTGGATGAAGAGGAGGATTCTGTACAGACATTTGTTTGTACGGTCCCTATGTTTCATATCTACGGTCTCGTTGCTTTTGCTACAGGACTGCTAGCAACAGGAGCTACCATCGTTGTGCTGCCTAAATTCGAGATGAATGATTTACTCCTGGCAATATCAAAGTACAAGGTTTCCTACTTCCCATTGGTCCCCCCAATTCTGGTAGCAATGGTAAACCATGCTGATCAAATCAAGAAGCATTACGATTTGAGTTCTGTCAAGCGTGTTCTGTCTGGTGGTGCACCCTTAAGCAAGGAGCTGATAGAGGGATTTATAGCCGAGTTCCCCGCGGTGTCAATCAATCAAGGCTATGGACTGACAGAGTCAACTGCCATTGGGGCGTCCACGGACTCCTTAGAGGAGAGCCGGAGGTATGGGACTGCAGGATTGTTGTCACCGAACATGGAGGCAAAGATAGTTGACCCAGAGAGTGGTAAAGCCTTGGGGGTTAATCAAACTGGCGAGCTCTGGCTCCGGGGACCTTCTGTTATGAAAGGGTACTTCAACAATCCTGATGCAACTGCTTCAACTCTTACTTCTGACGGATGGCTAAAAACAGGAGATGTATGCTACTTTGATGAAGATGGTTTCCTCTTCGTGGTTGATAGGCTAAAGGAGTTGATCAAATACAAAGGATACCAGGTTCCACCTGCAGAATTAGAGGCATTGCTACTTACTCATCCAGAGATTGCAGATGCTGCTGTTATTCCGTTCCCTGATAAGGAAGTTGGTCAGTTTCCAATGGCATATGTTGTGAGAAAAGCTGGAAGTACTTTATCTGAGAAGGAGATCATGGATTTCGTTACAGGGCAGGTTGCTCCTTACAAAAGAATCCGTCGTGTGGCGTTTATAAGTTCCATCCCCAAGAATGCATCAGGGAAGATTCTGCGGAAAGACCTCATCAAAATGGCTACTTCTGGTTCCAGGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15943.p1 GENE.R_Transcript_15943~~R_Transcript_15943.p1 ORF type:complete len:544 (+),score=69.00,AMP-binding|PF00501.24|3.3e-101,AMP-binding_C|PF13193.2|9.5e-17 R_Transcript_15943:175-1806(+)
MASSIDPRSGYSTTNSTFYSKRPSIPLPPNPSLDINTFISARPHHGTTAFIDASTGQTLSYTSLWSQVNSLSHSLSSLGVRKGHVILILSPNSLSFPVICLSVMSLGALITTTNPLNTPSEIAKQARDSKPFLAFTTRELAPKLSGSPNLPIILIDGDDGRFGKLVGVDPGELVRVRDRVDQNDAAALLYSSGTTGASKGVISSHRNMIAMVQTVINRFRLDEEEDSVQTFVCTVPMFHIYGLVAFATGLLATGATIVVLPKFEMNDLLLAISKYKVSYFPLVPPILVAMVNHADQIKKHYDLSSVKRVLSGGAPLSKELIEGFIAEFPAVSINQGYGLTESTAIGASTDSLEESRRYGTAGLLSPNMEAKIVDPESGKALGVNQTGELWLRGPSVMKGYFNNPDATASTLTSDGWLKTGDVCYFDEDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPEIADAAVIPFPDKEVGQFPMAYVVRKAGSTLSEKEIMDFVTGQVAPYKRIRRVAFISSIPKNASGKILRKDLIKMATSGSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST