Transcript Information: R_Transcript_159521.p1


Annotated TAIR IDAT5G04760.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1373752-1374529 | Reverse length=215
E-Value1.8E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9880463870252
Replicate 24.3505847709446
Replicate 37.1540561861858
Condition 2: 8 Hour
Replicate 112.279698036607
Replicate 218.130444736096
Replicate 313.736353982995
Condition 3: 24 Hour
Replicate 15.5153891237728
Replicate 24.1063845381856
Replicate 32.3005095016258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_159521.p1 GENE.R_Transcript_159521~~R_Transcript_159521.p1 ORF type:5prime_partial len:333 (+),score=41.93,Myb_DNA-binding|PF00249.27|8e-10,Myb_DNA-binding|PF00249.27|3.6e-12,Myb_DNA-bind_6|PF13921.2|0.81,Myb_DNA-bind_6|PF13921.2|0.00091 R_Transcript_159521:3-1001(+)
CAAACAAACACAAAATCCACGCTTTCTCTCCAACATTTCCTTCCCTATAAATACAATTCAAACACTCTTCTCTCCTTTGTATTATCCAAAACCCCCCCAAAAAAATCCCATTTTCTTTCTTTATTACTACTAAACCCTTTTTCCTTACCAACTCAAAATCAAGTTCAAGTCAAGAAGTCTCATAACAAAAGAATCACAATTTTGACAATTTTGTTGAAAACCCAGAAAAACCCATATCTTAATTTCTGTATTTATTGTGAGGGGAAGAAGATTTGGGGGTGGATGAGAGGGGAAAATTGGAGCAGAGTAGAGGATAAGTTGTTTGAAGAAGCCCTTGTGATATTTGGAGAAGAATCAGGGGATGATCGGTGGCATAAGATAGCTGGTCACGTGCCGGGGAGGTCGGTGTCCGAGGTTAGACAACACTACGAGGATCTCCTCCATGATGTTTCTCAGATCGACTCGGGCCGAGTTCAACTCCCCTGTTACTCGGATGACTCGTCTGGGTCATGGTGGGTTGGGCCCGAGTCCAACTCAGCTGCTCGGTCTAATCAGATTTCATTTGGGTCTAACGGTGGTGGTGCCAAAACTACTAAGCATAGTGAGGTTGAGCGGAAGAAGGGCACCCCTTGGACTGAGGAAGAACACAGGCTCTTCCTGATTGGGCTCGAGAAATATGGCAAGGGTGATTGGAGGAGTATATCAAGGAATGTAGTGGTGACAAGAACGCCAACCCAGGTGGCTAGCCACGCTCAAAAATATTACCTTCGCCAAAACTCGGGCAAGAAAGAGAGGAAGAGATCTAGCATCCACGACATAACAACAGTTGACGATAAATCTGCAGCACGCCCTGCTGTTGAACAAAATTGGATTCCCCCACCTGGTGGAAACCCGATCCCGGAACATCCCTCACTGCAGCCTATGGGGACATCACCCCAATTCGGTACCACTCAAGGAGGAGCCTCCTTTGGGTATCAGAATTTTGGTTTTCCAATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_159521.p1 GENE.R_Transcript_159521~~R_Transcript_159521.p1 ORF type:5prime_partial len:333 (+),score=41.93,Myb_DNA-binding|PF00249.27|8e-10,Myb_DNA-binding|PF00249.27|3.6e-12,Myb_DNA-bind_6|PF13921.2|0.81,Myb_DNA-bind_6|PF13921.2|0.00091 R_Transcript_159521:3-1001(+)
QTNTKSTLSLQHFLPYKYNSNTLLSFVLSKTPPKKSHFLSLLLLNPFSLPTQNQVQVKKSHNKRITILTILLKTQKNPYLNFCIYCEGKKIWGWMRGENWSRVEDKLFEEALVIFGEESGDDRWHKIAGHVPGRSVSEVRQHYEDLLHDVSQIDSGRVQLPCYSDDSSGSWWVGPESNSAARSNQISFGSNGGGAKTTKHSEVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLRQNSGKKERKRSSIHDITTVDDKSAARPAVEQNWIPPPGGNPIPEHPSLQPMGTSPQFGTTQGGASFGYQNFGFPM*

Click here to download the sequence:
Link to NCBI Protein BLAST