Transcript Information: R_Transcript_15977.p1


Annotated TAIR IDAT3G08530.1
Annotated Gene NameClathrin, heavy chain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2587171-2595411 | Reverse length=1703
E-Value8.8E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1128.53126672281
Replicate 2104.74820985464
Replicate 3122.99645492601
Condition 2: 8 Hour
Replicate 195.426857002736
Replicate 2106.71109723099
Replicate 3117.17873078272
Condition 3: 24 Hour
Replicate 1121.22997649963
Replicate 2109.96997141274
Replicate 3106.52016280957


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15977.p1 GENE.R_Transcript_15977~~R_Transcript_15977.p1 ORF type:5prime_partial len:360 (+),score=107.99,Clathrin|PF00637.16|2.4e-14,Clathrin|PF00637.16|1.4e-31 R_Transcript_15977:3-1082(+)
GAGCATATCAAGCTCTTTTCAACTAGGCTTAACATACCTAAGCTGATTAGGGCTTGTGATGAGCAGCAGCACTGGAAAGAACTAACTTACTTGTACATTCAATATGATGAGTTTGACAATGCTGCCACTACTGTGATGAACCATTCTCCGGAAGCATGGGATCACATGCAGTTTAAAGACATCATTGTCAAAGTGGCAAATGTGGAGCTCTACTATAAGGCAGTGCACTTCTACTTGCAAGAACATCCTGACCTTATCAATGATGTTCTTAATGTTCTTGCACTCCGTGTTGACCATGCTCGTGTTGTAGACATCATGAGAAAGGCTGGTCAACTTCCACTTGTGAAGCCATACATGGTGGCAGTCCAAAGCAATAATGTGTCTGCTGTGAATGAAGCCCTTAATGAGATCTATCTTGAGGAAGAGGACTATGACAGGCTTCGCGAGTCAATAGACTTCCATGATAACTTTGACCAAATAGGCCTTGCTCAGAAGGTTGAAAAGCATGAATTACTTGAAATGAGACGTATTGCGGCTTACATTTACAAGAAGGCTGGCAGATGGAAGCAGTCCATTGCTTTGTCGAAGAAGGACAATCTTTACAAAGATGCAATGGAGACTGCCTCTCAATCTGGTGATCGTGAACTTGCTGAGGAGCTTCTTGTGTACTTCATTGAGAAGGGAAAGAAAGAGTGTTTTGCGTCATGTCTCTTTGTTTGCTACGATCTAATTAGAGCTGATGTTGCCCTGGAGTTGGCGTGGTTGAACAATATGGTTGATTTTGCCTTCCCGTATCTGCTGCAGTTTATCCGTGAGTACACTGGCAAGGTTGATGAGCTCATCAAAGACAAACTTGAAGCTCAAAGTGAGGTTAAAGCAAAAGAGGCAGAGGAGAAAGAAAAGGTTGCACAACAGAACATGTATGCACAGTTACTTCCTCTCGCTTTACCAGCACCACCAATGCCAGGAATGGGAGGAGGTGGTGCAATGGGTGGTGGTTTTGCTCCACCACCACCTATGGGCAGTATGGGCATGCCTCAAATGCCTCCTTTTGGCATGCCGCCGATGGGCTCATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15977.p1 GENE.R_Transcript_15977~~R_Transcript_15977.p1 ORF type:5prime_partial len:360 (+),score=107.99,Clathrin|PF00637.16|2.4e-14,Clathrin|PF00637.16|1.4e-31 R_Transcript_15977:3-1082(+)
EHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGQLPLVKPYMVAVQSNNVSAVNEALNEIYLEEEDYDRLRESIDFHDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIEKGKKECFASCLFVCYDLIRADVALELAWLNNMVDFAFPYLLQFIREYTGKVDELIKDKLEAQSEVKAKEAEEKEKVAQQNMYAQLLPLALPAPPMPGMGGGGAMGGGFAPPPPMGSMGMPQMPPFGMPPMGSY*

Click here to download the sequence:
Link to NCBI Protein BLAST