Transcript Information: R_Transcript_15985.p1


Annotated TAIR IDAT3G44530.1
Annotated Gene NameHomolog of histone chaperone HIRA
Annotated Gene Symbol(s)HIRA
Annotation TypeOrtholog
Chromosome Positionchr3:16116026-16121247 | Forward length=1058
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.891566569942
Replicate 26.1076598794622
Replicate 38.4729382558259
Condition 2: 8 Hour
Replicate 110.39966568856
Replicate 212.344204287792
Replicate 316.953874231867
Condition 3: 24 Hour
Replicate 114.465978903702
Replicate 210.269223702769
Replicate 314.218871353291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15985.p1 GENE.R_Transcript_15985~~R_Transcript_15985.p1 ORF type:complete len:1076 (+),score=236.05,Hira|PF07569.7|1.8e+03,Hira|PF07569.7|1e-51,WD40|PF00400.28|0.057,WD40|PF00400.28|0.0058,WD40|PF00400.28|4.5e-06,WD40|PF00400.28|0.0016,WD40|PF00400.28|1e+04,WD40|PF00400.28|89,WD40|PF00400.28|48,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.2e+04 R_Transcript_15985:476-3703(+)
ATGATTGCTGAAAAACCCAGTTGGGTTAGACATGAGGGCTTGCAAATTTTCTCCATTGATATTCAACCTGGTGGTCATCGTTTTGCTACTGGTGGTGGTGACCACAAGGTGCGAATATGGAATATGAAGTCTGTTGCAAGAGATTTTGAGAAGGATGATCAAACACACAGGATACTTGCAACTCTTCGTGATCACTTTGGTTCAGTTAACTGTGTCAGGTGGGCTAAACATGGTCGGTACATTGCATCTGGGTCTGATGATCAGGTCATTTTGATTCATGAAAGGAGGCCCGGTTCTGGAACTACTGAGTTTGGTAGTGGAGAGCCACCTGATGTTGAAAATTGGAAGGTTGTCATGACGCTAAGGGGACACACTGCTGACGTGGTGGATCTTAATTGGTCTCCAGATGACTCAACATTGGCTAGTGGAAGCCTGGACAATACAATTCATATATGGAATATGAGCAATGGGATGTGCACTGCTGTTCTCAGAGGTCATTCGAGCTTGGTTAAAGGTGTTACATGGGACCCCATTGGTTCATTTATAGCAAGCCAATCTGATGATAAGACAGTTATTATATGGAGAACCAGTGATTGGAGCCTTGCCCACAAGACAGAAGGCCACTGGGCCAAATCACTTGGATCAACTTTCTTTAGGCGGCTTGGGTGGTCTCCTTGTGGTCATTTTATAACCACAACGCATGGCTTCCAAAAACCTAGACACTCTGCACCTGTATTAGAAAGAGGCGAGTGGGGTGCCACTTTTGATTTCTTGGGACATAACGCCCCTGTTATAGTAGTGAAATTCAATCATTCAATGTTCAGAAGATATATCTCTAGTGCTCAGGATGTCAGAGCCTCATCAGGAGGATGGGCTAATGGTGCTTCTAACACTGGAGGAAAAGATTCAAATCCTTATAATATTATTGCTATTGGTAGTCAGGATCGTACTATAACTGTCTGGACCACTGCAAGTCCTCGTCCTCTCTTTGTTGCAAAGCATTTCTTTACCCAAAGTGTTGTCGATTTATCCTGGAGTCCTGATGGATATTCGCTTTTCGCGTGTTCCTTGGATGGCTCAGTAGCCACCTTCCATTTTGAAGTAAAAGAGCTTGGTCAGAGGCTGACAGATGACGAAGTTGATGAGTTAAAGAGAAACCGTTATGGCGATGTTAGGGGGCGCCAGGCCAATTTGGCTGAAAGCCCTGCGCAGCTTTTGCTTGAAGCGGCTGCAGCAAAACAAATCACTAGCAAAAAAGTTCCCACAGACTTGCAGCAGAAGCAGGCAGCCCCAAAGGTTCCTTCTGATGCGGGGATAAGCATTAAGGTCTCTGAATCTCATCTTGAAAATGGAAAGAAAAACGAGGGTGTAAGCTCAGATGGTTTAAATAAAGCCCCAAACTCTGCCCGAGTTTCTAGTCCTGTGAAGCAGAAAGAGTACAGGCGTCCAGATGGAAGAAAAAGGATTATCCCTGAACCTGTGGGAGTGCCTCCACAACAAGAAAATATCACTGCTGCATCGCACTCTCAAACCCTAGATTTACCACTTTCAGATGGTAGAAAGGATGTTTCTAATGCTAAAGAGGTTTCTATTACAAAAATCCTTGGGTCAGGCTCACATAAGGAGCGTGCTGGGGTCACTGCAAGGGCAAGCTTTAGTGATAGCCTGGTTATTGAAAAGGTTCCAGCTTCTTCAGGTAGAGATTCTGCTGTTGTTGTTGAACCATCTGGGAGTTCAAAGGCCTCTAGTTCGTTAGCTGCTTGTAACACTGCTCTTGCAATAAGAGTGATTGATAAAAAGGAGGGTGCCGATGCAATGCCAGTTTCTTTGGAAGCTCGTCCTAGAGAGCATGCTGTAAGTGACATTGTCGGCATGGGCAGTACGTCAGTGATGAAAGAAACAGAGATTATATGCAGTAGAGGATCCCAAACTCTATGGTCTGACCGTATTTCTGGGAAGGTATCTGTTTTGGCTGGGAATGCAAACTTTTGGGCTGTGGGGTGTGAAGATGGCTGCCTACAGGTGTACACAAAATGTGGAAGACGTGCCATGCCAACAATGATGATAGGTTCCGCTGCAGTGTTTGTAGACTGTGATGAATGTTGGAAATTGTTGCTTGTCACAAAGAAGGGCTCTCTGTATTTGTGGGATTTATTCAACAGAAGCTGTCTCCTTCAGGATTCATTGGAGTCTTTAGTTACTGCAGATTCATGTGCATCTCCTAAAGACGCAGGCACTATTAAAATAATCTCAGCAAAGTTATCAAAGTCTGGTTCTCCCCTAGTAGTATTGGCAACTCGCCATGCTTTCCTCTTTGATATGAGCCTCAAGTGTTGGCTTCGAGTGGCTGATGATTGCTTCCCTGCCTCAAACTTTGCTAGCTCCTGGAATTTGGGGTCTACACAGAGCGGGGAATTAGCAGCATTGCAGGTGGATGTAAGAAAATTCTTGGCAAGAAAGCCTGGGTGGAGTAGGGTGGCTGATGATGGTGTGCAAACACGTGCTCATTTGGAGGCACAGTTGGCATCAGCTTTGGCTTTGAAATCGCCTAATGATTATCGCCAATGTCTTCTGTCATATGTCAGATACCTTGCAAGAGAAGCAGATGAGTCTCGATTGCGTGAAGTCTGTGAGAGTTTCCTTGGACCGCCTACTGGGATGGGAGGTGATTCGTCATTGGACACAAAGAACATCGCATGGGATCCTTGTGTTCTTGGATTGAAGAAACACAAACTTTTGAGGGAAGATATCCTTCCGGCTCTTGCATCAAATAGGAAAGTGCAGAGGCTACTGAATGAGTTCATGGATCTCCTATCTGAGTATGGAAGTGGTGAAAATCATGTTGAACTTGCTAAACCTATCCAGCGTGTTACACCCACGCCAGCCGCTGATCAAGGAGACTTGAATTTGCCACTGAATGATCAGATGCAAGTTGATCCACCTGCTCTAGAGCAAGTAACGGAACGTGCCCCGCAAAAAGCAGGACAAATGGTAACTATCACGGGTGCAGGGGATCAAATCGATAGCCCTACTGTCCCAACAGATCTTAATGAAAGGCTCTCGCCAGCAGAAGATCAAGTTAACTCTATTTCAGCAACTGTCAATTTAGTTATGTCAGCTGTAGATCAGGCAAAGTCATTACCACCCTCCTTGGAGCCGATGAACATAGACATACGAAAGACAGAAAAAGTGGTAGTGGCCCTTCCTGCTAAGGAAACTGACTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15985.p1 GENE.R_Transcript_15985~~R_Transcript_15985.p1 ORF type:complete len:1076 (+),score=236.05,Hira|PF07569.7|1.8e+03,Hira|PF07569.7|1e-51,WD40|PF00400.28|0.057,WD40|PF00400.28|0.0058,WD40|PF00400.28|4.5e-06,WD40|PF00400.28|0.0016,WD40|PF00400.28|1e+04,WD40|PF00400.28|89,WD40|PF00400.28|48,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.2e+04 R_Transcript_15985:476-3703(+)
MIAEKPSWVRHEGLQIFSIDIQPGGHRFATGGGDHKVRIWNMKSVARDFEKDDQTHRILATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHERRPGSGTTEFGSGEPPDVENWKVVMTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGMCTAVLRGHSSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWSLAHKTEGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWGATFDFLGHNAPVIVVKFNHSMFRRYISSAQDVRASSGGWANGASNTGGKDSNPYNIIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEVKELGQRLTDDEVDELKRNRYGDVRGRQANLAESPAQLLLEAAAAKQITSKKVPTDLQQKQAAPKVPSDAGISIKVSESHLENGKKNEGVSSDGLNKAPNSARVSSPVKQKEYRRPDGRKRIIPEPVGVPPQQENITAASHSQTLDLPLSDGRKDVSNAKEVSITKILGSGSHKERAGVTARASFSDSLVIEKVPASSGRDSAVVVEPSGSSKASSSLAACNTALAIRVIDKKEGADAMPVSLEARPREHAVSDIVGMGSTSVMKETEIICSRGSQTLWSDRISGKVSVLAGNANFWAVGCEDGCLQVYTKCGRRAMPTMMIGSAAVFVDCDECWKLLLVTKKGSLYLWDLFNRSCLLQDSLESLVTADSCASPKDAGTIKIISAKLSKSGSPLVVLATRHAFLFDMSLKCWLRVADDCFPASNFASSWNLGSTQSGELAALQVDVRKFLARKPGWSRVADDGVQTRAHLEAQLASALALKSPNDYRQCLLSYVRYLAREADESRLREVCESFLGPPTGMGGDSSLDTKNIAWDPCVLGLKKHKLLREDILPALASNRKVQRLLNEFMDLLSEYGSGENHVELAKPIQRVTPTPAADQGDLNLPLNDQMQVDPPALEQVTERAPQKAGQMVTITGAGDQIDSPTVPTDLNERLSPAEDQVNSISATVNLVMSAVDQAKSLPPSLEPMNIDIRKTEKVVVALPAKETDS*

Click here to download the sequence:
Link to NCBI Protein BLAST