Transcript Information: R_Transcript_15999.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24833960482611
Replicate 20.42849592686323
Replicate 30.3116562938252
Condition 2: 8 Hour
Replicate 10.1665705098452
Replicate 20.76057421228522
Replicate 30.37044103306912
Condition 3: 24 Hour
Replicate 11.4055800343492
Replicate 20.90021464859499
Replicate 30.297791900502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15999.p1 GENE.R_Transcript_15999~~R_Transcript_15999.p1 ORF type:5prime_partial len:147 (+),score=3.13,RVT_2|PF07727.10|1.8e-09 R_Transcript_15999:3-443(+)
ATAAAACCGCACCAAACATACCCTCCTCATCAGATTCTAATCCCACCGCTTCTCTGCCGCTCATTACTGATCATTTTGCACCACCACCAAAAATCAATCTATCCCTTTCCATTACTGTCACACATTCTAAGCTTCAGATGCACAAATCAAACTCAAAAGCATACGAACTCCATTACTACTCAACCTAAACTCGCTGAACCCATTACTATAGCCCAGGCTCTTCAAGACCCACATTGGCGTCAAGCCATGTTGGATGACCTTCGTGCTCTCTACACCCTTGGCATGTGGGATCCGGTGCCCCTCAATTCCGGTCATATTCTCACTAAGTGCAAGTGGATGTTTCGTATCAAATATACACTTGATGGTACCATCGAACGTTATCGAGCACGACTTGTTGTCAAAGGATTTTCAACAAGGCGTAGAGTCCCACTTCTTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15999.p1 GENE.R_Transcript_15999~~R_Transcript_15999.p1 ORF type:5prime_partial len:147 (+),score=3.13,RVT_2|PF07727.10|1.8e-09 R_Transcript_15999:3-443(+)
IKPHQTYPPHQILIPPLLCRSLLIILHHHQKSIYPFPLLSHILSFRCTNQTQKHTNSITTQPKLAEPITIAQALQDPHWRQAMLDDLRALYTLGMWDPVPLNSGHILTKCKWMFRIKYTLDGTIERYRARLVVKGFSTRRRVPLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST