Transcript Information: R_Transcript_16006.p1


Annotated TAIR IDAT5G07120.1
Annotated Gene Namesorting nexin 2B
Annotated Gene Symbol(s)SNX2b
Annotation TypeHomolog
Chromosome Positionchr5:2207065-2209355 | Reverse length=572
E-Value2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.611751844229
Replicate 225.500961232886
Replicate 322.740143140908
Condition 2: 8 Hour
Replicate 131.609025659171
Replicate 235.492817904282
Replicate 336.666253453182
Condition 3: 24 Hour
Replicate 127.298919867124
Replicate 224.862291840287
Replicate 331.319315615615


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16006.p1 GENE.R_Transcript_16006~~R_Transcript_16006.p1 ORF type:complete len:550 (+),score=107.17,PX|PF00787.20|9.3e-21,Vps5|PF09325.6|1e-19 R_Transcript_16006:253-1902(+)
ATGATGGGCGAAGACAACGAATCTACTGAAGAATCCTCCCACCTCTACGCATCTAAAGAAGAAATGGAGAGCTTAGTCCTCGACGACCATCCCCAACCTTCCTCCAATGGCGGTCCTCATTCACCTCCTCCCGAGATCTCCACCACCACTGTTGACGACAACAACAACTTACCTAACCCTACCGAAGCCCTAAATCGCTCTTCTCCATCAAAAAACCCTAATTCCTCCTCCCTCAACTCCTTCTTAGACCCTCCCTCTTACGCCGACGCTATGTTTCGCTCCTTCGATTTCGATTCCTCCGCCGAGATCGATGGCCACGATCATTCCAGCTCATCATCATCGTCCACTTCGGATTACCTCCACATTTCGGTATCGGACCCTCAGAAGGTTCTGGAAACTTCTAATTCGCTGGTTCCTGGGAGCGGTTCTTACTACACTTACCTAATCACGACACGAACTAACTTGCCGGAGTTCGAATCAAAGGAGTTTAGCGTCAGGAGGAGGTTCAGAGAGGTGGTGACGTTGTCGGAGCGCTTGTCGGAGGCATACCGAGGGTTCTTTATTCCGTTGAGGCCGGATAAGAGCGTAATGGAGAGCCAAATGATGCAAACGGCTGAGTTCGTGGAGCAAAGGCGAGTTGCCGTCGAGAAGTACTTGAGGAAACTGGCTGCTCATCCTGCTCTTAGGAAGAGTGATGAGCTGAGAGTGTTTTTGCAGGTAGAAGGGAAGCTGCCGTTGGTGAAGACGACCGATGTCGCATCGAGGATGCTTGATGGAGTGGTTAAGTTGCCGAGTCAGCTAATTGGAGACTCCGCTGTCACGCCACAGGAGGTGGTGCAACCAGCTAAAGGTGGTAGGGACTTGTTGAGGTTGTTTAAGGAGCTTAGACAGGCTGTTGCTAATGACTGGGGCGGGGCGAAACCACCTGTTGTTGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAGGCTTACTGAGCTTGAACAGCAACTTAGCAATGTGTCTGAACAGGCGGAAACACTAGTGAAAGCACAACAAGATATTGGGGAAACAATGGGGGAGCTAGGGTTGGCGTTTGTTAAGTTGACAAAGTTTGAGATTGAAGAAGCCATTTATGAGTGCCAACGAGCAAGTGCGGGTGATATGAAGAATGTGGCAACAGCTTCAGTTAAAGCGAGCAGACTTTATCGCGAATTGAATGCACAGACTGTGAAGCATTTGGACAAGCTCCATGATTATCTAGGAATGATGATAGCTGTTGATAATGCCTTTACAGACCGCTCCAATGCTTTGTTAACTGTCCAAACTCTTGTATCCGAGGTGGCTACGTTGCAGTCACGAATCGAAAAGCTAGAAATTGCTTCCTCCAAAATATTTGGTGGAGACAAGTCTAGGATGCGCAAAATTGAAGAATTGAAGGAAACGATGAAAGTGACTGAGGATGCTAAATGTTGTGCTGCTAGAGAGTATGAAAGGATCAAGGACAACAACAGGAGTGAGCTTGCAAGACTAGACGAAGAAAGACGTACGGACTTTCTGAGTATGCTGAAGGGGTTTGTGGTAAATCAGGCTGGATATGCAGAAAAGATGGCTAGTGTCTGGGAAAAGGTTGCAGAGGAAACTAGTGGCTATGCAAAAGATTTTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16006.p1 GENE.R_Transcript_16006~~R_Transcript_16006.p1 ORF type:complete len:550 (+),score=107.17,PX|PF00787.20|9.3e-21,Vps5|PF09325.6|1e-19 R_Transcript_16006:253-1902(+)
MMGEDNESTEESSHLYASKEEMESLVLDDHPQPSSNGGPHSPPPEISTTTVDDNNNLPNPTEALNRSSPSKNPNSSSLNSFLDPPSYADAMFRSFDFDSSAEIDGHDHSSSSSSSTSDYLHISVSDPQKVLETSNSLVPGSGSYYTYLITTRTNLPEFESKEFSVRRRFREVVTLSERLSEAYRGFFIPLRPDKSVMESQMMQTAEFVEQRRVAVEKYLRKLAAHPALRKSDELRVFLQVEGKLPLVKTTDVASRMLDGVVKLPSQLIGDSAVTPQEVVQPAKGGRDLLRLFKELRQAVANDWGGAKPPVVEEDKEFLEKKERLTELEQQLSNVSEQAETLVKAQQDIGETMGELGLAFVKLTKFEIEEAIYECQRASAGDMKNVATASVKASRLYRELNAQTVKHLDKLHDYLGMMIAVDNAFTDRSNALLTVQTLVSEVATLQSRIEKLEIASSKIFGGDKSRMRKIEELKETMKVTEDAKCCAAREYERIKDNNRSELARLDEERRTDFLSMLKGFVVNQAGYAEKMASVWEKVAEETSGYAKDFS*

Click here to download the sequence:
Link to NCBI Protein BLAST