Transcript Information: R_Transcript_16028.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.093565003197871
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16028.p1 GENE.R_Transcript_16028~~R_Transcript_16028.p1 ORF type:complete len:194 (-),score=22.95,rve|PF00665.22|6.6e-26 R_Transcript_16028:2422-3003(-)
ATGGCATTTAAGATTCGGGCATTTAAATTACAAGAGTTTATAACTCTTAAACAAAAGAAAATTGTTATTGGTCTCCCTAATATAAATGATGAAAGAAAAATTTGTGAGGGCTGCATATATGGAAAAATGCATAGATTACCATTTCCCACATCTTCTTGGAGGACCAAAGTTCCATTAGAAGTTATTCATGCTGATATTTGGGGCCCATCCAAGAATCCCTCTGTTGGGGGAAAAAGATATTTTTTGTTGTTTGTTGATGATTATTCTCGTATGATGTGGGTTTATTTCTTAAACAAAAAATCAGAAGCATTCTCCTTCTTTTTACAATTCAAAGCCCTCACAGAGAAACAAAGTGGGCATTCTCTAAAAATTCTCAGAACAGACCGTGGGGGAGAATTTACAAGTAAAGAATTTCAAAATTTTTGCAAAAACAATGGTATTAGAAGAGAATTAGCTGTAAGAAGAACACCTCAACAAAATGGTGTGGCGGAAAGGAAAAACCACACCATCGCAGAAATGACCGGTAGTATGTTACAAGGCAAAAATTTGCCAAAATATCTTTGGGACTATTTATATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16028.p1 GENE.R_Transcript_16028~~R_Transcript_16028.p1 ORF type:complete len:194 (-),score=22.95,rve|PF00665.22|6.6e-26 R_Transcript_16028:2422-3003(-)
MAFKIRAFKLQEFITLKQKKIVIGLPNINDERKICEGCIYGKMHRLPFPTSSWRTKVPLEVIHADIWGPSKNPSVGGKRYFLLFVDDYSRMMWVYFLNKKSEAFSFFLQFKALTEKQSGHSLKILRTDRGGEFTSKEFQNFCKNNGIRRELAVRRTPQQNGVAERKNHTIAEMTGSMLQGKNLPKYLWDYLYS*

Click here to download the sequence:
Link to NCBI Protein BLAST