Transcript Information: R_Transcript_160376.p1


Annotated TAIR IDAT2G36380.1
Annotated Gene Namepleiotropic drug resistance 6
Annotated Gene Symbol(s)PDR6, ATPDR6
Annotation TypeOrtholog
Chromosome Positionchr2:15257583-15263627 | Forward length=1453
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0478163579058
Replicate 20.21695373564487
Replicate 30.52598708601957
Condition 2: 8 Hour
Replicate 10.59035954522635
Replicate 20.71883431866039
Replicate 32.1465165257174
Condition 3: 24 Hour
Replicate 11.1070354805552
Replicate 20.6077224034143
Replicate 30.8795288909775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160376.p1 GENE.R_Transcript_160376~~R_Transcript_160376.p1 ORF type:3prime_partial len:871 (+),score=131.31,ABC_tran|PF00005.23|5.7e-13,ABC_tran|PF00005.23|8.3e-19,ABC2_membrane|PF01061.20|1.1e-32,ABC2_membrane|PF01061.20|5.7e+03,PDR_assoc|PF08370.7|7.6e+03,PDR_assoc|PF08370.7|6.5e-26,AAA_21|PF13304.2|4.5,AAA_21|PF13304.2|1.3e+03,AAA_21|PF13304.2|1.2e+03,AAA_21|PF13304.2|0.025,AAA_21|PF13304.2|0.038,AAA_25|PF13481.2|0.028,AAA_25|PF13481.2|0.0065,AAA_25|PF13481.2|4.5e+03,SMC_N|PF02463.15|0.14,SMC_N|PF02463.15|3.5,SMC_N|PF02463.15|17 R_Transcript_160376:189-2798(+)
ATGACTTTACTCCTTGGGCCTCCGAGTTCCGGGAAAACAACACTGTTACTTGGTTTAGCTGGAAAGTTTGACAGTGATCTAAAGGTAACAGGGAAAATTACATATTGCGGACATGAACTAAATGAATTTGTTTCCAAGAGGACCTCTGCATATATTAGTCAAAATGACCTTCTTTACGGAGAGATGACAGTCAGAGAGACATTAAACTTCGCAGCATGGAGTTTAGGTGTTGGGACCAGGTATGACTTGTTAAAAGAATGCTCGAGAAGGGAGAAACAAGCAGGAATTCAGCCAGATCCTGAGATTGATTCTTTCATGAATGCTATAGTAACAGAAGGCCAAAAAACAAACCTTATCACTGGTTATGTCATCAAGGTTCTAGGATTGGATGATTGCGCTGATACCATTGTTGGTGATGATATGATACGAGGCATTTCTGGTGGTGAAAAGAAGCGTACAACTATTGGTGAAATGTTGGTTGGACCAGCACAGGTTCTATTAATGGATGAAATATCAACAGGATTGGATAGCACAACTGCTTTTCGGATATGTAAATACATGAGAGATATGGTTCATGCAATGGACTTAACAATGGTCATTTCTCTCCTTCAACCAACTTCCGAGACTTTTGAGCTCTTTGATGACATCATCCTACTTTCGGAAGGCCAAATCGTCTATCAAGGTCCATGTGAGCATGTCCTCGAGTTTTTTGAATCTGTGGGCTTCAAGTGTCCTGAAAGGAAGGGAGTTGCAGAGTTTCTCCAAGAAGTGAATTCTAAGAAAGACCAAGAACAGTACTGGTCCAAGAAGGACCAACCTTACAAATATATCTCTGTTCCCGAATTTGTTCAGCTCTTCCAGAGTTCCCAAAATGGGCCAAATCTAGCTTCAGATCTCAGGGTTCCTTTTCTTAGAGAAAATATTTACCCTGGTGTTTTGGCAAAAGAAAAATACGGCATCTCAAATCGGGAATTACTGAAGGCAGGGTTTTCGAGAAGGTGGCTGTTAACAAAGCGAAATGCGTTTTTCTACGTTTTCAAGAGTCTTGAAATCACAGTCACGGCACTCGCTGCCATGACTGTATTCTTTAGGACAACAATGCATCATAGCACAATTGCAGATGGTGAAAAGTACTTCGCTGCTATATTTTTCAGTGTCTCAAATTTTGTGTTTAGTGATATGGCAGAAATGACCTTGACGGTGATGGGGCTGCCAGTTTTCTACAAACAAAAGGATTTCTTGTTTTACCCTGCTTGGGCTTATGGCCTACCAGTTTGCATCCTTCGGGTGCCACTTTCAGCCATGGAATCAGCACTGTGGACTGTTCTTACCTATTATACCATTGGTTTTGCACCAGGTGTGGGTAGGTTTTTCTGTCAGTGGTTGGCATATTTCTGTATTCATCAAATGGGTTTGTCTATCTTTCGAGCAATTGGTGCCTTAGGAAGAACGATTGTGATTGCTCATTCTTTTGGCTTCATCCTATTGCTTGCTGTTTTGGTACTGGGTGGTTATATCATCAGGAAAGGTGACATTCAGCCCTGGATGACATGGGCCTACTACCTTTCTCCGATGATGTATGGACAGCAAGCTTTAGTTATTAATGAGTTTCTTGATGAAAGATGGAGCACTCCTAATACAGACCTTAGAATCAACGAACCAACTGTCGGTAAAGCCATCCTCGCGTCAAGAGGATTTTTTAAGGAACAACAGTGGTTTTGGATAAGTATTGGAGCACTCGTGGGGTTCTCTCTTCTCTTCAACCTTTTATATATACTGGCACTGACCTACTTGAATTCTCCTGGTGATACAAAAGCTACAGTGACAGGGGACTATGATGCTAACAAAAACAAGGTGTCGTCTGTGGAGACCCTTGATGGTAAAGAAATGGCCGTGATAAGTTATTCCGGTTGTACTCGTTCATCTGTTCGTCTAGATGTGAGAAGGATGGTTCTGCCATTCCAACCTATTTCACTTGCATTCAACCATATAAATTACTATGTGGATACACCTTCTGAAATGAAAAGCCTAGGTCATGAAGATGAGCGCTTACAATTACTGCGAGATGTGTGTGGTGCTTTTAGGCCTGGGATATTAACAGCAATAGTTGGTGCAACCGGTGCTGGAAAAACCACATTGATGGATGTCTTGGCGGGAAGAAAGACTAGAGGGTATATTGATGGTAGCATATCTGTGTCTGGTTACCCAAAGAACCAAGCAACCTTTGCTCGTGTTAGCGGCTACTGTGAGCAGAATGACATTCATTCACCACATGTCACTGTCTTAGAATCCCTCGTATTTTCAGCCTGGCTTCGTCTTTATGCAGATGTGGACAAGAGCACTCGGAAGATGTTTATTGAAGAGGTGATGGAATTGATTGAACTAAAACCATTGCGGAATGCTATGGTTGGCCTACCGGGGGTGAATGGCCTTTCCATTGAACAAAGGAGACGATTGACAATAGCAGTAGAGTTGGTTGCTAACCCCTCAATCATATTTTTGGATGAGCCTACTTCTGGGCTTGATGCCAGAGCTGCTGCCATTGTTATGCGCACCATAAGGAACATGGTAGACACAGGAAGAACTGTTGTTTGCACAATTCATCAGCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160376.p1 GENE.R_Transcript_160376~~R_Transcript_160376.p1 ORF type:3prime_partial len:871 (+),score=131.31,ABC_tran|PF00005.23|5.7e-13,ABC_tran|PF00005.23|8.3e-19,ABC2_membrane|PF01061.20|1.1e-32,ABC2_membrane|PF01061.20|5.7e+03,PDR_assoc|PF08370.7|7.6e+03,PDR_assoc|PF08370.7|6.5e-26,AAA_21|PF13304.2|4.5,AAA_21|PF13304.2|1.3e+03,AAA_21|PF13304.2|1.2e+03,AAA_21|PF13304.2|0.025,AAA_21|PF13304.2|0.038,AAA_25|PF13481.2|0.028,AAA_25|PF13481.2|0.0065,AAA_25|PF13481.2|4.5e+03,SMC_N|PF02463.15|0.14,SMC_N|PF02463.15|3.5,SMC_N|PF02463.15|17 R_Transcript_160376:189-2798(+)
MTLLLGPPSSGKTTLLLGLAGKFDSDLKVTGKITYCGHELNEFVSKRTSAYISQNDLLYGEMTVRETLNFAAWSLGVGTRYDLLKECSRREKQAGIQPDPEIDSFMNAIVTEGQKTNLITGYVIKVLGLDDCADTIVGDDMIRGISGGEKKRTTIGEMLVGPAQVLLMDEISTGLDSTTAFRICKYMRDMVHAMDLTMVISLLQPTSETFELFDDIILLSEGQIVYQGPCEHVLEFFESVGFKCPERKGVAEFLQEVNSKKDQEQYWSKKDQPYKYISVPEFVQLFQSSQNGPNLASDLRVPFLRENIYPGVLAKEKYGISNRELLKAGFSRRWLLTKRNAFFYVFKSLEITVTALAAMTVFFRTTMHHSTIADGEKYFAAIFFSVSNFVFSDMAEMTLTVMGLPVFYKQKDFLFYPAWAYGLPVCILRVPLSAMESALWTVLTYYTIGFAPGVGRFFCQWLAYFCIHQMGLSIFRAIGALGRTIVIAHSFGFILLLAVLVLGGYIIRKGDIQPWMTWAYYLSPMMYGQQALVINEFLDERWSTPNTDLRINEPTVGKAILASRGFFKEQQWFWISIGALVGFSLLFNLLYILALTYLNSPGDTKATVTGDYDANKNKVSSVETLDGKEMAVISYSGCTRSSVRLDVRRMVLPFQPISLAFNHINYYVDTPSEMKSLGHEDERLQLLRDVCGAFRPGILTAIVGATGAGKTTLMDVLAGRKTRGYIDGSISVSGYPKNQATFARVSGYCEQNDIHSPHVTVLESLVFSAWLRLYADVDKSTRKMFIEEVMELIELKPLRNAMVGLPGVNGLSIEQRRRLTIAVELVANPSIIFLDEPTSGLDARAAAIVMRTIRNMVDTGRTVVCTIHQP

Click here to download the sequence:
Link to NCBI Protein BLAST