Transcript Information: R_Transcript_160405.p1


Annotated TAIR IDAT3G26540.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9744542-9746644 | Reverse length=700
E-Value1.7E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4300752884751
Replicate 20.56827593719325
Replicate 31.0115510904284
Condition 2: 8 Hour
Replicate 11.0115243354275
Replicate 20.98744634911218
Replicate 31.6031337015157
Condition 3: 24 Hour
Replicate 11.7332817422626
Replicate 21.1624566651729
Replicate 31.9642811898498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160405.p1 GENE.R_Transcript_160405~~R_Transcript_160405.p1 ORF type:complete len:702 (+),score=106.81,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.8e-07,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|8.3e-14,PPR_2|PF13041.2|7.4e+02,PPR|PF01535.16|56,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.018,PPR|PF01535.16|14,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0079,PPR|PF01535.16|4.6e-07,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.49,PPR|PF01535.16|0.00024,PPR|PF01535.16|3.7,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|4.9,PPR|PF01535.16|33,PPR_3|PF13812.2|0.79,PPR_3|PF13812.2|53,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|5.5e+03,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|41,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|1 R_Transcript_160405:67-2172(+)
ATGGGTGTCAATGGTCCATCCTCTGCACTCAAACACATTCTAAAATCCAACACAATCTTTGACAAATCATCCCTTCCTACCACCACAGAATCCGTAACAAAAACCATCCATTCTCTCATACAATCTGGCAATCTAAAGAAAGCAGTTTCTCTCCTCTTTTCATCACCATTCCCCTTCACTTTCCCTCTATATTCCAAGCTCTTCAACCTCTGTTCTTCCCATCGGGCTGTTATTGAGGCCCGAAAACTTGAGTCCCACCTCATCACTTACTATGACCCCCCACCCACCTTTTTGCTCAACAGGGCAATCGAGACTTATGCTAAATGTGGGTGTTTACGTGATGCCCGTGAACTGTTCGACGAAATGCCTCAGAGAGATGGAGGCACTTGGAATTCCATGATCACTGCGTACGTCCACGGTTGCCCCAATGAGGCTCTGGTGCTTTTTCTTGAGATGGGTCGGTCTGCGGTGGATCCGAGTGCGGTCACCTTCGCGAGTGTTTTGGGTTGTTGTGCTGGTTTGCTTGAGTTGGGGTTCTTGAGGGCGGTCCATGGGCTTGTAGTGAAATATGGGATTAGTGGGAATGTGATCTTGGGAAGCTCTCTTGTTGATATATATGGGAAATGTGGTGTTATTGGTGATTCTAGGAAGATGTTTGATAGGATTAAGAGTCCGAATGATGTGTCGTGGAATGTGGTTGTGAGGAGGTATCTTGAGGCCGGGCATTACAGAGAGGCTGTTTCTATGTTTTTCCGGGCTCTTAGAGGTGGTGTTATTCCATTGACACATACATTTGCAAGTGCTCTCGTTGCGTGTTCTGGGATGCTTGCTTTTAAGGAGGGAACTCAAATTCATGATGTTGCCATTAAGATTAATTATGAGGAAAATGAGATGATTGCTACCTCGCTCATTGATATGTACGTCAAATGTGGTGATTTAGAGAGTGCTAGGAAGATTTTTGATATGCCGAGTGATAAGGATTTGATCTTATGGACTAATATGGTGTCAGGGTATGCATCAGCAGGAAGAATTGAAAAAGCTAGAGAGCTTTTTGATGACATGCCTGAGCGGAGCATTGTGTCCTGGAATGCAATGCTGGCAGGGTATGTGCACTCTGGCCAATGGGAGGAAGCCCTACGTTTTATATTCCTTATGAGTAAGGATTTAAATGGAATCAACCATATCACTCTTAATTTAATCTCGAATGTGTCGGCTGCCCTTTCTGATGTCGAATTAGGGAAGCAAGTTCATTGTCGTATTTACAGGCTGGGACTTTACTCTGATGTGTACATCGGTAATTCCCTTCTTGACATGTATGGTAAATGTGGGACGTTTAGAAGTGCTAGAATTTGTTTTTGCCAGATGAGAGGTTGGAGGGACAGTATATCTTGGAACTCTTTATTGAGTGCCTTTGCACGACGTCAAATGAGTGAAGAGGTCATGAGATTGTTCCCAGAGATGCTTCAGGAAACAATTCCAAATGAACATACGTTAGCAATCCTTTTTGCAGTGTGTGCTAACTTATTTGCACTCCAACAAGGAAAAGAGATCCATGGTTTTATGATAAGGAATGGGTATGATATAGATGTGGTTCTTCTGGGTGCAATGCTCGACATGTACTCAAAATGCAGGCATCTTGATTACGCACTTAAAGTCTTCATAATTGCTCGCACAGGGGATGTGATTCTTTGGAACTCTATGATTATGGGATGTTGTCACCATGGTCTGACATCTGAGGCTCTCACATTGTTTGAGTTGATGAAAGAGGATGGGGTTGAACCTGACCATGTCACTTTCCAAGCAGTTTTAAATGCTTGTATTTGTGGGGGCTATGTTGATCGTGGAAAGCGATATTTTGATGCAATGAGTAATGAGTATTTTGTCATGGCGAGGTTAGAGCATTATGAGTGTATGATTGAACTTTACAGTAGACATGGAGCAATGGAAGAGCTTAAGAATTTTATCGGGAGATTGCCATGTGACCCTACTGTCTCCATGTTGACAAGAGTCCTTGATGCTTGTAGACAATATGGTAACTCAAGGTTGGAAAAGTGGGCTACTAAAAAATTGGATAAGCTATCCAAAGGGAGCAGTCAATCGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160405.p1 GENE.R_Transcript_160405~~R_Transcript_160405.p1 ORF type:complete len:702 (+),score=106.81,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.8e-07,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|8.3e-14,PPR_2|PF13041.2|7.4e+02,PPR|PF01535.16|56,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.018,PPR|PF01535.16|14,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0079,PPR|PF01535.16|4.6e-07,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.49,PPR|PF01535.16|0.00024,PPR|PF01535.16|3.7,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|4.9,PPR|PF01535.16|33,PPR_3|PF13812.2|0.79,PPR_3|PF13812.2|53,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|5.5e+03,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|41,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|1 R_Transcript_160405:67-2172(+)
MGVNGPSSALKHILKSNTIFDKSSLPTTTESVTKTIHSLIQSGNLKKAVSLLFSSPFPFTFPLYSKLFNLCSSHRAVIEARKLESHLITYYDPPPTFLLNRAIETYAKCGCLRDARELFDEMPQRDGGTWNSMITAYVHGCPNEALVLFLEMGRSAVDPSAVTFASVLGCCAGLLELGFLRAVHGLVVKYGISGNVILGSSLVDIYGKCGVIGDSRKMFDRIKSPNDVSWNVVVRRYLEAGHYREAVSMFFRALRGGVIPLTHTFASALVACSGMLAFKEGTQIHDVAIKINYEENEMIATSLIDMYVKCGDLESARKIFDMPSDKDLILWTNMVSGYASAGRIEKARELFDDMPERSIVSWNAMLAGYVHSGQWEEALRFIFLMSKDLNGINHITLNLISNVSAALSDVELGKQVHCRIYRLGLYSDVYIGNSLLDMYGKCGTFRSARICFCQMRGWRDSISWNSLLSAFARRQMSEEVMRLFPEMLQETIPNEHTLAILFAVCANLFALQQGKEIHGFMIRNGYDIDVVLLGAMLDMYSKCRHLDYALKVFIIARTGDVILWNSMIMGCCHHGLTSEALTLFELMKEDGVEPDHVTFQAVLNACICGGYVDRGKRYFDAMSNEYFVMARLEHYECMIELYSRHGAMEELKNFIGRLPCDPTVSMLTRVLDACRQYGNSRLEKWATKKLDKLSKGSSQSS*

Click here to download the sequence:
Link to NCBI Protein BLAST