Transcript Information: R_Transcript_160413.p1


Annotated TAIR IDAT3G56950.2
Annotated Gene Namesmall and basic intrinsic protein 2;1
Annotated Gene Symbol(s)SIP2;1
Annotation TypeOrtholog
Chromosome Positionchr3:21078411-21079644 | Reverse length=260
E-Value1.1E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.17737046418
Replicate 29.767509717472
Replicate 313.089564340658
Condition 2: 8 Hour
Replicate 14.8433579016529
Replicate 25.9792834227346
Replicate 38.2446876077948
Condition 3: 24 Hour
Replicate 17.2321297493866
Replicate 26.8670219988977
Replicate 39.3002701233703


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160413.p1 GENE.R_Transcript_160413~~R_Transcript_160413.p1 ORF type:complete len:273 (+),score=40.34,MIP|PF00230.16|2.8e-08 R_Transcript_160413:196-1014(+)
ATGAGAATCTTTCTGGTTTGCCATACATTACAAAACTCAAAACAAAGAGCATTTCATATGCTCAAACTAGAAAGAGAAAGAAAAACACAAGGCAAAGGAACAATAATGGGATTGGGGGGAATTGGGTTAATAGTCAAGGATTTCATGCTATCATTTATGTGGGTATCTTCTGGGGCATTGGTAAAACTTCTTGTGTTCAACATTCTGGGGTTTCATCATGATGTTATTGGTGAAATTGTGAAACTGGGTTTTTCTCTTATCAATTTATTCTTCTTTGCCCTTTTGTTGAAATACTCAAAAGGTGGGGCCTACAATCCTCTCAACCTTTTGGCAAGTGCTATTTCTGGGGGTTTTGAGCAGTTTTTGTTCATTGTTGGTGCCAGGATACCTGCTCAGGTACTTGGAGCAATTTATGGCGTTAGGTTCCTCATTCATATGTTTCCTGATATTGGACGAGAGCCAAAACTGAATGTTGACATCCATCATGGTGCCTTCACTGAAGGATGTTTAACATTTATGATTGTTTTCATTTCTTTGTCATTGAATAGAAGCATTCCTGGGAGTTTTGTGACGAAGACTTGGATCTCAAGCATTTCTAAGCTCACGCTTAATATTCTAGGTGCTGACTTAACGGGTGGATGCATGAACCCTGCTTCTGTGATGGGATGGGCGTATGCTCGTGGGGATCACTGGACCAAGGAGCACATATTGGTTTATTGGCTTGCCCCGATGGAGGGGACCTTATTGGCTGTATGGATCTCCAGGCTATTGTTTCAGAAGACAAAGGAGAGGACTGACACAAAACCTAAATCAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160413.p1 GENE.R_Transcript_160413~~R_Transcript_160413.p1 ORF type:complete len:273 (+),score=40.34,MIP|PF00230.16|2.8e-08 R_Transcript_160413:196-1014(+)
MRIFLVCHTLQNSKQRAFHMLKLERERKTQGKGTIMGLGGIGLIVKDFMLSFMWVSSGALVKLLVFNILGFHHDVIGEIVKLGFSLINLFFFALLLKYSKGGAYNPLNLLASAISGGFEQFLFIVGARIPAQVLGAIYGVRFLIHMFPDIGREPKLNVDIHHGAFTEGCLTFMIVFISLSLNRSIPGSFVTKTWISSISKLTLNILGADLTGGCMNPASVMGWAYARGDHWTKEHILVYWLAPMEGTLLAVWISRLLFQKTKERTDTKPKSE*

Click here to download the sequence:
Link to NCBI Protein BLAST