Transcript Information: R_Transcript_16042.p1


Annotated TAIR IDAT4G33625.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16153114-16154543 | Reverse length=200
E-Value1.9E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.877373223191
Replicate 236.160295161402
Replicate 339.195973220083
Condition 2: 8 Hour
Replicate 138.08912325127
Replicate 237.516590644656
Replicate 345.782395675865
Condition 3: 24 Hour
Replicate 151.527522888847
Replicate 250.727095448328
Replicate 338.425081561442


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16042.p1 GENE.R_Transcript_16042~~R_Transcript_16042.p1 ORF type:complete len:90 (+),score=20.36 R_Transcript_16042:482-751(+)
ATGCTGCAGATCTTTGTTGCTGTCATGACAAGAGCATTCCCTGATTACTATGGGCAGAGGCAGGACCTGGTTCTTCTTCAAAATATAGCAAGTTATCTGCTGCTTTCATGTGGTGTCGTATATACAGTGTCGGGAATCTTATGCATTGGTGTTCTTAAACGTGCTCGGGAAAAGAAGGAAACCTCAAGGGACCAAGCAGTTAAGGATCTAGAGGAAATGGAGAGAAGGCGGCAGGAGCTCGAAGCTTTGTTAATTGAAGACAGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16042.p1 GENE.R_Transcript_16042~~R_Transcript_16042.p1 ORF type:complete len:90 (+),score=20.36 R_Transcript_16042:482-751(+)
MLQIFVAVMTRAFPDYYGQRQDLVLLQNIASYLLLSCGVVYTVSGILCIGVLKRAREKKETSRDQAVKDLEEMERRRQELEALLIEDRA*

Click here to download the sequence:
Link to NCBI Protein BLAST