Transcript Information: R_Transcript_160673.p2


Annotated TAIR IDAT5G17420.1
Annotated Gene NameCellulose synthase family protein
Annotated Gene Symbol(s)IRX3, CESA7, ATCESA7, MUR10
Annotation TypeOrtholog
Chromosome Positionchr5:5736859-5741407 | Reverse length=1026
E-Value8.9E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2922450233429
Replicate 20.18580796828582
Replicate 31.0135724600067
Condition 2: 8 Hour
Replicate 10
Replicate 20.39576782019798
Replicate 31.7669709453474
Condition 3: 24 Hour
Replicate 10.8126657425736
Replicate 20.390358564435
Replicate 31.3558755115777


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160673.p2 GENE.R_Transcript_160673~~R_Transcript_160673.p2 ORF type:3prime_partial len:113 (+),score=25.87,zf-UDP|PF14569.2|1.5e-44,zf-RING_4|PF14570.2|1.9e-07,Prok-RING_1|PF14446.2|1.5e-05,Prok-RING_1|PF14446.2|11,FYVE_2|PF02318.12|3.4e-06 R_Transcript_160673:56-391(+)
ATGGAAGCAAGTGCCGGACTTGTTGCCGGTTCCCATAACCGGAATGAGCTCGTTGTCATACATGGCCATGAAGAGCCAAAGCCATTGAAGGATCTGAGTGGTCAAGTGTGTGAGATATGTGGTGATGAGATTGGGCTTACGGTCGATGGAGACTTGTTTGTTGCTTGCAACGAGTGTGGTTTCCCGGTGTGCCGCCCTTGCTATGAGTATGAACGACGAGAAGGCAGTCAGCTCTGTCCTCAGTGCAAGACTAGATACAAGAGGCTTAAAGGGAGTCCAAGGGTGGAGGGAGACGAAGATGAAGAAGACATTGATGACATTGAGCATGAATTCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160673.p2 GENE.R_Transcript_160673~~R_Transcript_160673.p2 ORF type:3prime_partial len:113 (+),score=25.87,zf-UDP|PF14569.2|1.5e-44,zf-RING_4|PF14570.2|1.9e-07,Prok-RING_1|PF14446.2|1.5e-05,Prok-RING_1|PF14446.2|11,FYVE_2|PF02318.12|3.4e-06 R_Transcript_160673:56-391(+)
MEASAGLVAGSHNRNELVVIHGHEEPKPLKDLSGQVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDIDDIEHEFN

Click here to download the sequence:
Link to NCBI Protein BLAST