Transcript Information: R_Transcript_160727.p1


Annotated TAIR IDAT5G54160.1
Annotated Gene NameO-methyltransferase 1
Annotated Gene Symbol(s)ATOMT1, OMT1
Annotation TypeHomolog
Chromosome Positionchr5:21982075-21984167 | Forward length=363
E-Value9E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91264804773594
Replicate 21.1810418984168
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 11.5303665592028
Replicate 20.97828858055187
Replicate 31.0210280973968
Condition 3: 24 Hour
Replicate 11.4348629517315
Replicate 20.27569073613222
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160727.p1 GENE.R_Transcript_160727~~R_Transcript_160727.p1 ORF type:3prime_partial len:160 (+),score=22.17,Dimerisation|PF08100.7|4.2e-20 R_Transcript_160727:355-831(+)
ATGGCGGAATTGTCGCTCAAAATTGCTACTCAAGAACATCACGACAAGGATGATGACATTGACTACGTTAGAGCCGGAGAACTAACAGGATTATTAGCGTATCCTATGGTGTTGAAAACCGCCGTTGAGCTGGATGTGTTTGGGATTATTGCACGGGCTGGCCCAGGCTGCCAATTGTCAGCAGCAGAGATAGTGGCCCAGCTTCCCGTCAAGAACCCGAACGCAGCCAGTATGGTAGACCGCTTGCTCCGCCTCTTGGCCACCCGTTCCGTGCTTACTTGTTCTGTTGTGAAGGATGAAAATGGCGGTATTGTTGAGCGGAAATATGGGCTATCACCACTTGGAAACTACTTTGTTCCCAATGAAGATGGAGAGTCATTAGCGGGGTTGGCACTTTTGCTTCAAGACCCGGTTTTCGTTGCTAGCTGGAGTAAGCTCACAGAAGCCGTGTTGGAAGGAGGTGTCCCATTCAACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160727.p1 GENE.R_Transcript_160727~~R_Transcript_160727.p1 ORF type:3prime_partial len:160 (+),score=22.17,Dimerisation|PF08100.7|4.2e-20 R_Transcript_160727:355-831(+)
MAELSLKIATQEHHDKDDDIDYVRAGELTGLLAYPMVLKTAVELDVFGIIARAGPGCQLSAAEIVAQLPVKNPNAASMVDRLLRLLATRSVLTCSVVKDENGGIVERKYGLSPLGNYFVPNEDGESLAGLALLLQDPVFVASWSKLTEAVLEGGVPFNK

Click here to download the sequence:
Link to NCBI Protein BLAST