Transcript Information: R_Transcript_160740.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25077669613941
Replicate 20.16483847235563
Replicate 30.6968683665169
Condition 2: 8 Hour
Replicate 10.24029308093469
Replicate 20.52665472442439
Replicate 30.33845005082174
Condition 3: 24 Hour
Replicate 10.29288664765471
Replicate 20.60603262898544
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160740.p1 GENE.R_Transcript_160740~~R_Transcript_160740.p1 ORF type:complete len:1019 (+),score=107.42,RVT_1|PF00078.23|5.5e-38,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|4.1e-16,RVT_3|PF13456.2|2.1e+03,RVT_3|PF13456.2|5.7e-09 R_Transcript_160740:248-3304(+)
ATGAAAGGAAAAGGTTGGTGCGTGAATTGGAACAGTATGTTCGGGAGGAGGAGGCGTATTGGCAGCAGCGATCTCGTATTTTTTGGCTACATACAGGGGATAGAAATACATCCTTTTTCCATAAAAGGGCGTCGAATAGAAAGGCCAAAAATTCCATCTCAAAGCTCAAAGATGATGTGGGAAGACTGTGCGATAATGATGAGGAGGTGTGTCAGGAAGCAATCAGATATTTTTCGATGTTATTCAAGTCAGATGTGGGACCCATGTCTAAACGAGGCTCTTCTCGGTCTAGAGGAACGGGTTACGGCAGATATGAACTCGGAGTTAAGCAAGCCTTACACGGAGGAGGAGATCAAGGAAGCTCTTGGGCAGATGCACCCGCTCAAGGCCCCTGGCCCTGATGGTATGTGTCCCTTATTTTTTCAAATGTATTGCCATATTGTTGGTAATGAGGTGAATAATCTTGTGTTGAACTTTCTTAATGGTGGAAATCTACCTAATGATCTGAACCATACTTATATTGTGTTAATTCCCAAAAAGAAATGTCCGGAGGTGATGACTGATTTTAGGCCTATTAGTTTATGCAATGTTCTGTATAAGATAATCTCGAAGGTTCTTGCTAATAGGATTAAAATCTTTCTTCCGGATATAGTCTCTCTGAACCAAAGTGCTTTTACACCTGGGAGATTAATCACGGATAACATTCTTGTGGCCTTTGAGACGTTTCATCATATGAAGTCAGAGAGGTCAAAAGAGGGCTATGCGACGCTCAAATTAGACATGGCGAAAGCCTATGATAGAGTGGAGTGGGATTTTCTTGAAAGTGTGCTTATCAAGTTGGGTTTTGATCATTGGTGGATTAATAGAGTCATGGTGTGTGTTAGGTCGGTCTCTTTTTCTGTGCTTATAAACGGTTCTCCGACGGAGTGTTTCCGGCCTGAGAGGGGACTCCGTCAAGGGGACCCAATTTCACCTTACCTTTTTCTCCTTGTCACTGAAGCTCTGTCAGGTTTGATTAGAAGAGCGGAGTTGAATGGGCTTCTACAAGGGGCGCGTATTTGCCATGGTGCGCCAACAATTACACATCTCTTCTTTGCGGATGATAGTTTGCTGTTCTTTAGGGCTACCACAACTCAAGCCAATACCATAAAGGACATTCTTGGGACCTATGAGGCGGCGTCGGGTCAAAAAGTTAGTTATGCCAAATCACAAGTGTGGTTTAGTAAGGGGGTACGGGATGATATGAGGAGCGAGATTATACAATCCTTGAATGTTGAGGAGGTCCAACAGCATGAGTGGTATCTTGGACTCCCTCCAATGATGGGTCGCTCAAGGAAGGGGGTTTGTAGTCCATTGAAGGATCGTTTGTGGAAGAAGCTCCAAGGGTGGAAAGGGATGTTGTTGTCTAAAGCTGATAGGGAGGTCATGATAAAGGCGGTGGCCCAATCTCTTCCTACCTACGCGATGAGTGTTTTTAAATTGCCAACATCCTTTTGTAAGGAGGTGACCTCTATGGTGGCTAATTTCTTCTGGGGCCAGAGAAAGGAGGAAAGGAAAATTCATTGGCATTCTTGGCAAAAGTTGTGTAGACCAAAGAAAATGGGTGGACTAGGCTTTCGAGACCTTAAAATTTTTAACTGGGCTTTGTTGGGTAAGCAAGCTTGGAGATTGGCGCGGGGCGAAGGTGGGCTACTGGAACAACTTCTTAGGGCCAGGTATTACCCTCAAGGGACTTTTCTTTCAAGCTCGTTGGGGGAAAATCCTAGCTATACTTGGAGGGGCATTTGGGAGGCTCGGTGGGTGGTCATGAAGGGGATGCGCTGGCGAATTGGTAATGGGCAGCGAGTGAAGGTCTGGGGGGATGCTTGGCTAGGCAGCAGCGGATCGGGGAAAGTTTTGAGTCCTATGTGTATTAATGCACCAGATATGTATGTTTCGGAGCTAATTAATGGGATGACTGGCGAATGGGATGTAGACAAAATCCGGGATATCTTCCTTCCCTTTGAGGCTACCCGGGTTATCTCTATCCCAATCAGCGCTAGGCTTCCTCCAGATTCTATTTACTGGAGCTGGGAAAAAGATGGGTGCTATTCAGTCCGTAGCGCATACCATGGAATTATGGAAGGGTCTGCTCTGGTTCATGTAGCGTCTTCCTCTCGGGTGAATAACGGGTTGTGGACACAACTCTGGGGTGTACAAGTACTCCCTCGCATAAAAATGTTTTTGTGGCGAATGTGTCAAGAAGGACTGCCAACTAAGATGGGGCTGCATAAAAGAGTGGAATCGATTGACCCAAGATGCGGAGTGTGCGGGCTGGTGGATGAGGACATTTTCCACGCTATTCGGGACTGCCCTTGCGCAGCTGAGGTATGGGTGAGAAGTGGGATGGATGTTTACCTGGGCACCCAGTTCCGATCTGTACGTGATTGGGTGGAAAAGATGCTGGAAAAGTTAAATGGCAGGGAGCTGGAGATGTTTTGTTGCATCGCCTGGGCCATATGGGGTAATAGGAACACGTTTATCTTCCAAGGTGAGCAGGAGTCTACCGGGGACATCATCTCCCGAGCAAATAGAGTGTGCACTGAAGCTAAATGTGGTGATGTGGACTTGGGAGTTGCACGAGTAAACAGAAGTACGAGATGGCAAGCTCCACCGGCTGGAGTTTGGAAGGTGAATAACGACGCTGGATGTTTGGTGGGTTATGGCATCAGTTTGGGCATTATCTGCAGAGATGAACTAGGACGCCCTATTATTGGGGCTACTCACAACATTGAAGTGGAATGGGAAGCGCGCCTGGCAGAAGCACAAGGAGTACTGAAAGGAATGCAATTGGCATATGCTGTTGGTGGTACTAATATTTTAGTTGAAACCGATTGTTTGGCTATTTACAATGCTCTTATTTTTAATAGGAAGGGTCTTAGCACTTTTGATCTTCTTATAGATGATATTAGGGACTTTTGTACTGTTTTTCATAGTGTTCGATTGTGGGATACTACCTATCCTGGGAATGTTTTATCTGTGTTGGTTTCTGATTCTAAGATGATGAATGAAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160740.p1 GENE.R_Transcript_160740~~R_Transcript_160740.p1 ORF type:complete len:1019 (+),score=107.42,RVT_1|PF00078.23|5.5e-38,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|4.1e-16,RVT_3|PF13456.2|2.1e+03,RVT_3|PF13456.2|5.7e-09 R_Transcript_160740:248-3304(+)
MKGKGWCVNWNSMFGRRRRIGSSDLVFFGYIQGIEIHPFSIKGRRIERPKIPSQSSKMMWEDCAIMMRRCVRKQSDIFRCYSSQMWDPCLNEALLGLEERVTADMNSELSKPYTEEEIKEALGQMHPLKAPGPDGMCPLFFQMYCHIVGNEVNNLVLNFLNGGNLPNDLNHTYIVLIPKKKCPEVMTDFRPISLCNVLYKIISKVLANRIKIFLPDIVSLNQSAFTPGRLITDNILVAFETFHHMKSERSKEGYATLKLDMAKAYDRVEWDFLESVLIKLGFDHWWINRVMVCVRSVSFSVLINGSPTECFRPERGLRQGDPISPYLFLLVTEALSGLIRRAELNGLLQGARICHGAPTITHLFFADDSLLFFRATTTQANTIKDILGTYEAASGQKVSYAKSQVWFSKGVRDDMRSEIIQSLNVEEVQQHEWYLGLPPMMGRSRKGVCSPLKDRLWKKLQGWKGMLLSKADREVMIKAVAQSLPTYAMSVFKLPTSFCKEVTSMVANFFWGQRKEERKIHWHSWQKLCRPKKMGGLGFRDLKIFNWALLGKQAWRLARGEGGLLEQLLRARYYPQGTFLSSSLGENPSYTWRGIWEARWVVMKGMRWRIGNGQRVKVWGDAWLGSSGSGKVLSPMCINAPDMYVSELINGMTGEWDVDKIRDIFLPFEATRVISIPISARLPPDSIYWSWEKDGCYSVRSAYHGIMEGSALVHVASSSRVNNGLWTQLWGVQVLPRIKMFLWRMCQEGLPTKMGLHKRVESIDPRCGVCGLVDEDIFHAIRDCPCAAEVWVRSGMDVYLGTQFRSVRDWVEKMLEKLNGRELEMFCCIAWAIWGNRNTFIFQGEQESTGDIISRANRVCTEAKCGDVDLGVARVNRSTRWQAPPAGVWKVNNDAGCLVGYGISLGIICRDELGRPIIGATHNIEVEWEARLAEAQGVLKGMQLAYAVGGTNILVETDCLAIYNALIFNRKGLSTFDLLIDDIRDFCTVFHSVRLWDTTYPGNVLSVLVSDSKMMNES*

Click here to download the sequence:
Link to NCBI Protein BLAST