Transcript Information: R_Transcript_160741.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40067475266456
Replicate 20.76815733230359
Replicate 30
Condition 2: 8 Hour
Replicate 11.6423446001201
Replicate 20.4090405214851
Replicate 30.39844998922801
Condition 3: 24 Hour
Replicate 11.6798395532466
Replicate 20.16137994310178
Replicate 30.82746200645587


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160741.p1 GENE.R_Transcript_160741~~R_Transcript_160741.p1 ORF type:complete len:820 (+),score=92.10,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.8e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3e-16,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|4.3e-09 R_Transcript_160741:248-2707(+)
ATGAAAGGAAAAGGTTGGTGCGTGAATTGGAACAGTATGTTCGGGAGGAGGAGGCGTATTGGCAGCAGCGATCTCGTATTTTTTGGCTACATACAGGGGATAGAAATACATCCTTTTTCCATAAAAGGGCGTCGAATAGAAAGGCCAAAAATTCCATCTCAAAGCTCAAAGATGATGTGGGAAGACTGTGCGATAATGATGAGGAGGTGTGTCAGGAAGCAATCAGATATTTTTCGATGTTATTCAAGTCAGATGTGGGACCCATGTCTAAACGAGGCTCTTCTCGGTCTAGAGGAACGGGTTACGGCAGATATGAACTCGGAGTTAAGCAAGCCTTACACGGAGGAGGAGATCAAGGAAGCTCTTGGGCAGATGCACCCGCTCAAGGCCCCTGGCCCTGATGCTCTGTCAGGTTTGATTAGAAGAGCGGAGTTGAATGGGCTTCTACAAGGGGCGCGTATTTGCCATGGTGCGCCAACAATTACACATCTCTTCTTTGCGGATGATAGTTTGCTGTTCTTTAGGGCTACCACAACTCAAGCCAATACCATAAAGGACATTCTTGGGACCTATGAGGCGGCGTCGGGTCAAAAAGTTAGTTATGCCAAATCACAAGTGTGGTTTAGTAAGGGGGTACGGGATGATATGAGGAGCGAGATTATACAATCCTTGAATGTTGAGGAGGTCCAACAGCATGAGTGGTATCTTGGACTCCCTCCAATGATGGGTCGCTCAAGGAAGGGGGTTTGTAGTCCATTGAAGGATCGTTTGTGGAAGAAGCTCCAAGGGTGGAAAGGGATGTTGTTGTCTAAAGCTGATAGGGAGGTCATGATAAAGGCGGTGGCCCAATCTCTTCCTACCTACGCGATGAGTGTTTTTAAATTGCCAACATCCTTTTGTAAGGAGGTGACCTCTATGGTGGCTAATTTCTTCTGGGGCCAGAGAAAGGAGGAAAGGAAAATTCATTGGCATTCTTGGCAAAAGTTGTGTAGACCAAAGAAAATGGGTGGACTAGGCTTTCGAGACCTTAAAATTTTTAACTGGGCTTTGTTGGGTAAGCAAGCTTGGAGATTGGCGCGGGGCGAAGGTGGGCTACTGGAACAACTTCTTAGGGCCAGGTATTACCCTCAAGGGACTTTTCTTTCAAGCTCGTTGGGGGAAAATCCTAGCTATACTTGGAGGGGCATTTGGGAGGCTCGGTGGGTGGTCATGAAGGGGATGCGCTGGCGAATTGGTAATGGGCAGCGAGTGAAGGTCTGGGGGGATGCTTGGCTAGGCAGCAGCGGATCGGGGAAAGTTTTGAGTCCTATGTGTATTAATGCACCAGATATGTATGTTTCGGAGCTAATTAATGGGATGACTGGCGAATGGGATGTAGACAAAATCCGGGATATCTTCCTTCCCTTTGAGGCTACCCGGGTTATCTCTATCCCAATCAGCGCTAGGCTTCCTCCAGATTCTATTTACTGGAGCTGGGAAAAAGATGGGTGCTATTCAGTCCGTAGCGCATACCATGGAATTATGGAAGGGTCTGCTCTGGTTCATGTAGCGTCTTCCTCTCGGGTGAATAACGGGTTGTGGACACAACTCTGGGGTGTACAAGTACTCCCTCGCATAAAAATGTTTTTGTGGCGAATGTGTCAAGAAGGACTGCCAACTAAGATGGGGCTGCATAAAAGAGTGGAATCGATTGACCCAAGATGCGGAGTGTGCGGGCTGGTGGATGAGGACATTTTCCACGCTATTCGGGACTGCCCTTGCGCAGCTGAGGTATGGGTGAGAAGTGGGATGGATGTTTACCTGGGCACCCAGTTCCGATCTGTACGTGATTGGGTGGAAAAGATGCTGGAAAAGTTAAATGGCAGGGAGCTGGAGATGTTTTGTTGCATCGCCTGGGCCATATGGGGTAATAGGAACACGTTTATCTTCCAAGGTGAGCAGGAGTCTACCGGGGACATCATCTCCCGAGCAAATAGAGTGTGCACTGAAGCTAAATGTGGTGATGTGGACTTGGGAGTTGCACGAGTAAACAGAAGTACGAGATGGCAAGCTCCACCGGCTGGAGTTTGGAAGGTGAATAACGACGCTGGATGTTTGGTGGGTTATGGCATCAGTTTGGGCATTATCTGCAGAGATGAACTAGGACGCCCTATTATTGGGGCTACTCACAACATTGAAGTGGAATGGGAAGCGCGCCTGGCAGAAGCACAAGGAGTACTGAAAGGAATGCAATTGGCATATGCTGTTGGTGGTACTAATATTTTAGTTGAAACCGATTGTTTGGCTATTTACAATGCTCTTATTTTTAATAGGAAGGGTCTTAGCACTTTTGATCTTCTTATAGATGATATTAGGGACTTTTGTACTGTTTTTCATAGTGTTCGATTGTGGGATACTACCTATCCTGGGAATGTTTTATCTGTGTTGGTTTCTGATTCTAAGATGATGAATGAAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160741.p1 GENE.R_Transcript_160741~~R_Transcript_160741.p1 ORF type:complete len:820 (+),score=92.10,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.8e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3e-16,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|4.3e-09 R_Transcript_160741:248-2707(+)
MKGKGWCVNWNSMFGRRRRIGSSDLVFFGYIQGIEIHPFSIKGRRIERPKIPSQSSKMMWEDCAIMMRRCVRKQSDIFRCYSSQMWDPCLNEALLGLEERVTADMNSELSKPYTEEEIKEALGQMHPLKAPGPDALSGLIRRAELNGLLQGARICHGAPTITHLFFADDSLLFFRATTTQANTIKDILGTYEAASGQKVSYAKSQVWFSKGVRDDMRSEIIQSLNVEEVQQHEWYLGLPPMMGRSRKGVCSPLKDRLWKKLQGWKGMLLSKADREVMIKAVAQSLPTYAMSVFKLPTSFCKEVTSMVANFFWGQRKEERKIHWHSWQKLCRPKKMGGLGFRDLKIFNWALLGKQAWRLARGEGGLLEQLLRARYYPQGTFLSSSLGENPSYTWRGIWEARWVVMKGMRWRIGNGQRVKVWGDAWLGSSGSGKVLSPMCINAPDMYVSELINGMTGEWDVDKIRDIFLPFEATRVISIPISARLPPDSIYWSWEKDGCYSVRSAYHGIMEGSALVHVASSSRVNNGLWTQLWGVQVLPRIKMFLWRMCQEGLPTKMGLHKRVESIDPRCGVCGLVDEDIFHAIRDCPCAAEVWVRSGMDVYLGTQFRSVRDWVEKMLEKLNGRELEMFCCIAWAIWGNRNTFIFQGEQESTGDIISRANRVCTEAKCGDVDLGVARVNRSTRWQAPPAGVWKVNNDAGCLVGYGISLGIICRDELGRPIIGATHNIEVEWEARLAEAQGVLKGMQLAYAVGGTNILVETDCLAIYNALIFNRKGLSTFDLLIDDIRDFCTVFHSVRLWDTTYPGNVLSVLVSDSKMMNES*

Click here to download the sequence:
Link to NCBI Protein BLAST