Transcript Information: R_Transcript_160804.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1751906368107
Replicate 21.4093407128748
Replicate 31.6317128150684
Condition 2: 8 Hour
Replicate 10.80501473799162
Replicate 20.55136420978266
Replicate 31.2929914414522
Condition 3: 24 Hour
Replicate 11.2579620398742
Replicate 20.99701855258774
Replicate 31.2892757555296


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_160804.p1 GENE.R_Transcript_160804~~R_Transcript_160804.p1 ORF type:complete len:730 (+),score=98.13,RVT_3|PF13456.2|2.1e-17,RVT_1|PF00078.23|8e-17,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.8e-17 R_Transcript_160804:2464-4653(+)
ATGGAAGAGGATTCAATCAAGCTAATCATGAACTGTATCTGCACAACCTCTGCCTCTTTGATCATAAATGGTAACCTGTCTGACTGGTTCATTCCTTCTAGAGGTATTAGACAAGGGGACCCTCTTTCCCCCTATGTCTTCATCATTTGTATGAACATGCTTTCTAGGCTTATCCAATACTCATGTGATCGAAACTTGTGGTCCCCCTTCTGCATTGGTAAGAAGAAGATCCCCATTTCTCATCTACTTTTTGCGGATGACCTTATTCTCTTTGGGGAAGCAAATGAGCAAACTTTCAATGTTGTTTCTGAAACCCTTGATCTTTTCTGTAGTGTTTCTGGTCAGAAAGTCAATTGTGATAAGAGCAAACTAATTTTCTCCCCTAATACCAATGACCTCGATAAACAATTGGGCCAACAAATCTTGAAGGTTGAAGCTAGTAATGATTTGGGTATGTATCTTGGTTTCCCTTTATCCCCCAATAGACCAAGGAGAAAGCACGTAGACTTCATTGTGAATAAAGTGAAAAAAAAGTTGTCAAACTGGAAATCAAACTTTCTTTCTAAAGCTGGTAAAGTGTGCTTGATTAATTCCACTCTGAATGCCATACCCAACTATTACATGCAACACATCTTGCTCCCAGCCTCTACCCTTGATAAGTTAGATTCTGTGGTGACCAAATTTTTGTGGGGAGACACTGATGAGACTAAGAAACTCTACCTTGTGTGTAAAGAGAAACTTTTTTTGCCCAGAAAGTTTGGGGGCCTTGGGATTAGGAGCAACAGAATTATGAATAAGGTTTATATGGCCAAACTTAACTGGAAATTAATGCATGACAATGATAACCTGGCACACAGAGTTCTTAAAAGCAAATATGTCTTAGATAGAGATGTTGCTGTTGATTTTAAAAACGGTTCACACCTGTGGCAAAACTTTGAGCATGGCTGTAGTTTGTTTAAGGATAGCATCATTTGGTGTCTTGGTGATGGTAAATCTATTTTTTTCTGGGAGGATAGATGGCTCATTAAAGGGTGCCTTAGATCTCAAATTTATGGACCTCTCAATAAGGGTGAAGCTGAGTTAAAGATTTGTGATTGCATTTCCAACCTTGAATGGGATTTCTCAAAATTCTCCTTCCATTTACCTAGTGATATTAGACAACAGATCATATCTACCCCCATTCCCTCTAACCAATTTCATGATGTTCCCTCATCACTTCTTGTTGATAAAGACATTTTTAACCCTAAATCTGCTTATGAAAATCTGATCCCTAGAGGGCATTGTGATGCTGATGTAGACTGGATTTGGAAATCTCCTACTCACCCCAAAGTTCATTTCTTTTTGTGGTTGGCCTGGATGGATAGACTTGCCCATAATGACCATCTTCATTTGAGGGGTATTCTACCTTCTCCTTTGTGTGGCATCTGTCATGTGCAACGTGAGCATTCTTTGCATGTGCTTAGAGATTGTAGTTGGGCTAAAGATGTTTGGATTTTATGTAAACCATCTAATACCTTTTTCTCTTGCAATCTAAAAGAATGGTTCAGCAGCAACATTGTCAGTTCTACCCAAACGGACAATGGTCTCCCTTGGTCTTGTCTTTTTTCCTCCCTGTGTTGGCATATTTGGCATGCTAGGAACCAATTCTTGTTCCAAAATAAGTCGATTCCCTCACCCCTATCTGCGTACAATCTAGCACTTTCTCGAGCCTGGGAATTTTGGTCTCTCATGGGAAAAATCAAGAAGAAAAGCTTTATTCAAACAATCAATGTTGGTTGGAACCCTCCTCCTCCAGATTGGAAAATGTTTAATTGTGATGCTTGCTATAATCCTTTCCAAGCTGCGATTGCAGGGGTTTGTAGGGACACAGGAGGTAACTGGACTTTTGGCTTCGTCAAGAAGTTGGGAGCACCAAATGCATTGACAGCTGAATTAGTAGCTATATTGGAAAGTTTAAAAATTATCAAGCTTCGTGGTTGGAGTAAAATCATTGTGCAATCAGATTCACTCCTTGCCATCAACTCGATTATTTCTGGTAGACCAACATCCAATAACTTACTAATCATTGTCAGAGAGTGCCGGAAGCTGATGGAGGACATTGAAGAAATCAAGCTGGAGCATTGTTATAGGGAGCAAAATCGAACAGCAGACTCTCTTGCTCATTTTGGAGTTGATTCTATAATCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_160804.p1 GENE.R_Transcript_160804~~R_Transcript_160804.p1 ORF type:complete len:730 (+),score=98.13,RVT_3|PF13456.2|2.1e-17,RVT_1|PF00078.23|8e-17,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.8e-17 R_Transcript_160804:2464-4653(+)
MEEDSIKLIMNCICTTSASLIINGNLSDWFIPSRGIRQGDPLSPYVFIICMNMLSRLIQYSCDRNLWSPFCIGKKKIPISHLLFADDLILFGEANEQTFNVVSETLDLFCSVSGQKVNCDKSKLIFSPNTNDLDKQLGQQILKVEASNDLGMYLGFPLSPNRPRRKHVDFIVNKVKKKLSNWKSNFLSKAGKVCLINSTLNAIPNYYMQHILLPASTLDKLDSVVTKFLWGDTDETKKLYLVCKEKLFLPRKFGGLGIRSNRIMNKVYMAKLNWKLMHDNDNLAHRVLKSKYVLDRDVAVDFKNGSHLWQNFEHGCSLFKDSIIWCLGDGKSIFFWEDRWLIKGCLRSQIYGPLNKGEAELKICDCISNLEWDFSKFSFHLPSDIRQQIISTPIPSNQFHDVPSSLLVDKDIFNPKSAYENLIPRGHCDADVDWIWKSPTHPKVHFFLWLAWMDRLAHNDHLHLRGILPSPLCGICHVQREHSLHVLRDCSWAKDVWILCKPSNTFFSCNLKEWFSSNIVSSTQTDNGLPWSCLFSSLCWHIWHARNQFLFQNKSIPSPLSAYNLALSRAWEFWSLMGKIKKKSFIQTINVGWNPPPPDWKMFNCDACYNPFQAAIAGVCRDTGGNWTFGFVKKLGAPNALTAELVAILESLKIIKLRGWSKIIVQSDSLLAINSIISGRPTSNNLLIIVRECRKLMEDIEEIKLEHCYREQNRTADSLAHFGVDSIIN*

Click here to download the sequence:
Link to NCBI Protein BLAST