Transcript Information: R_Transcript_161033.p1


Annotated TAIR IDAT5G11100.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTD, ATSYTD, NTMC2TYPE2.2, NTMC2T2.2, SYT4
Annotation TypeHomolog
Chromosome Positionchr5:3532402-3535221 | Forward length=569
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88117742540022
Replicate 20.9412134669375
Replicate 30
Condition 2: 8 Hour
Replicate 10.084434017059466
Replicate 20.38553244553768
Replicate 30.25036704303982
Condition 3: 24 Hour
Replicate 10.6333188200746
Replicate 20.30421046745624
Replicate 31.2075974999668


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161033.p1 GENE.R_Transcript_161033~~R_Transcript_161033.p1 ORF type:3prime_partial len:290 (+),score=53.50,C2|PF00168.26|1.3e-19 R_Transcript_161033:18-884(+)
ATGCCGACTTTAAAAGTTCTCGTAAATGAAGCCACTAACCTCTTTGGTGCTGATTTGGATGGAAAGAGCGATCCCTATTGTGTAATTAAGATCGGAGAAGGAAACCAATTTTCATCCATCGAAAAGACTCGAAAGATCTCCAACACAAGGAATCCCCAATGGAAGGAATGCTTCACTCTTAATGTAAATAACCCTCTCACTGAATGCCTCTTCCTTGAAGTTTGGAACAAAGAAACGATGAGTAAAGATGATAACTTAGGAACTGCCACCGTTCAACTCAACGACTTACAACGAGGAGTTGAAAAACAAGTCTGGGTCCAATTGCAAGGTGGAACTCATTCAGGAAATATCATTGGAAAGATTGCTCACTTAGGCAAGAAGAAAGAAGAAAGAACCAACGAAGGAAAAGTCTTCCTCGGCCTTACTGCTTTGGACTTTGGTATTGATCCCAACATTGCTCAACAACAATTTAGTGGTGGTCAAGGATTACAACATGGACAAGGCCAACAAGGAATGATGCAACAAGGCCAACATGGTATGCAACAACCCGGCATGCAACAAGGACAACAAGGAATCCAACAACCAGGTATTCAACAAGGACAACAAGGAATGCAACCAAATATTCAACAAGGACAACAACATGGCCTACAATCTGGACAACAAGGAATGCAATCTGGACAACAAGGAATACAACAAGGACAAGGACAACACGGCCTACAATCTGGACAACAAGGAATGCAATCTGGACAACAAGGATTCTCTGGATCGGGAATGCAAGGATCTCAAATTCCATCTTCTTCTACTCATCCCCCTGTTCCCCCTCCTCCTCCCCAATCCCAACAAAAGAGTGCTTACCCTCAAGACCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161033.p1 GENE.R_Transcript_161033~~R_Transcript_161033.p1 ORF type:3prime_partial len:290 (+),score=53.50,C2|PF00168.26|1.3e-19 R_Transcript_161033:18-884(+)
MPTLKVLVNEATNLFGADLDGKSDPYCVIKIGEGNQFSSIEKTRKISNTRNPQWKECFTLNVNNPLTECLFLEVWNKETMSKDDNLGTATVQLNDLQRGVEKQVWVQLQGGTHSGNIIGKIAHLGKKKEERTNEGKVFLGLTALDFGIDPNIAQQQFSGGQGLQHGQGQQGMMQQGQHGMQQPGMQQGQQGIQQPGIQQGQQGMQPNIQQGQQHGLQSGQQGMQSGQQGIQQGQGQHGLQSGQQGMQSGQQGFSGSGMQGSQIPSSSTHPPVPPPPPQSQQKSAYPQDL

Click here to download the sequence:
Link to NCBI Protein BLAST