Transcript Information: R_Transcript_161124.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value3E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6462082430193
Replicate 25.0900122221329
Replicate 31.5271158397435
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 20.40656148802156
Replicate 30.22001952267136
Condition 3: 24 Hour
Replicate 10.13913822562245
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161124.p1 GENE.R_Transcript_161124~~R_Transcript_161124.p1 ORF type:complete len:165 (+),score=25.87,Skp1|PF01466.15|8.8e+03,Skp1|PF01466.15|2.3e-42,Skp1_POZ|PF03931.11|2.2e-22,Skp1_POZ|PF03931.11|5.4e+03 R_Transcript_161124:24-518(+)
ATGACTGAGTTGGATCCTAATGCAGAAATTACCTTAACCTCTTGCGATGGACAAGATTTTAAAATTGTTGTGAAAGTTGCTCAAATGTCTGAGACTGTTAAGAATCTCATCCAAGATACCGGTATTGATGCACCAATTCCATTGCCTAACGTCACTGGAAAGATTTTGACCAAGGTCGTCGAGTACTGCCAATATCACACTGAACACCCAACTACCACCACCGAAGAAAAGAAAGATGAAAAGAGAACTGACGATATCATCCCTTGGGATCAAGAATTTTGCAAAGTTGACCAAGCAACTCTTTTTGAACTTATTCTCGCAGCTAACTATCTTGATATTAAACCATTGCTCGATCTCACCTGCAAAACTGTCGCAAATATGATCAAGGGAAAGACCCCTGAAGAAATTAGAAAAACCTTTAACATCAAGAACGATTTTACTCCTGAGGAAGAAGAACAAGTTCGTAAAGAAAACGAATGGTGCGAAGAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161124.p1 GENE.R_Transcript_161124~~R_Transcript_161124.p1 ORF type:complete len:165 (+),score=25.87,Skp1|PF01466.15|8.8e+03,Skp1|PF01466.15|2.3e-42,Skp1_POZ|PF03931.11|2.2e-22,Skp1_POZ|PF03931.11|5.4e+03 R_Transcript_161124:24-518(+)
MTELDPNAEITLTSCDGQDFKIVVKVAQMSETVKNLIQDTGIDAPIPLPNVTGKILTKVVEYCQYHTEHPTTTTEEKKDEKRTDDIIPWDQEFCKVDQATLFELILAANYLDIKPLLDLTCKTVANMIKGKTPEEIRKTFNIKNDFTPEEEEQVRKENEWCEER*

Click here to download the sequence:
Link to NCBI Protein BLAST