Transcript Information: R_Transcript_161125.p2


Annotated TAIR IDAT1G75950.1
Annotated Gene NameS phase kinase-associated protein 1
Annotated Gene Symbol(s)SKP1, ASK1, ATSKP1, SKP1A, UIP1
Annotation TypeHomolog
Chromosome Positionchr1:28516715-28517454 | Forward length=160
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6998641979216
Replicate 26.4120438397078
Replicate 32.6061557744125
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.13206741850645
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161125.p2 GENE.R_Transcript_161125~~R_Transcript_161125.p2 ORF type:5prime_partial len:167 (+),score=37.50,Skp1|PF01466.15|8.5e-39,Skp1_POZ|PF03931.11|2.6e-22,Skp1_POZ|PF03931.11|4.9e+03 R_Transcript_161125:2-502(+)
AAAAATATACCTATGGCAAACGTTAACCCAGATGATGAAGTCACTCTCGCATCCTGCGATGGACAAGAAACCAAAATTATTGTAAAGGTTGCTCAAATGTCTGAGACCATTAAGCATCTTATCGAAGATACTGGTATTGATGCACCAATCCCATTGCCAAACGTCACTGGAAAGATCTTGACCAAGGTCGTCGAATACTGCAAATATCACACTGAACATCCTGAACCAGAAGGAGAAAAGAAAGAAAAGAGAACTGATGATATCTCTCCTTGGGATCAAGATTTCTGCAATGTCGATCAACAAACTCTCTTTGAACTCATTCTTGCAGCAAACTATCTCGACATTAAGGCTCTCCTCGATCTTACTTGCAAGACTGTCGCAAATATGATCAAGGGAAAGACCCCTGAGGAAATTAAAAAAGTTTTTGGTATTGATAGAGACTTTACTCCAGAGGAGGAAGAGGAAGTTCGTAAGGAAAACCCATGGCTTGGAGAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161125.p2 GENE.R_Transcript_161125~~R_Transcript_161125.p2 ORF type:5prime_partial len:167 (+),score=37.50,Skp1|PF01466.15|8.5e-39,Skp1_POZ|PF03931.11|2.6e-22,Skp1_POZ|PF03931.11|4.9e+03 R_Transcript_161125:2-502(+)
KNIPMANVNPDDEVTLASCDGQETKIIVKVAQMSETIKHLIEDTGIDAPIPLPNVTGKILTKVVEYCKYHTEHPEPEGEKKEKRTDDISPWDQDFCNVDQQTLFELILAANYLDIKALLDLTCKTVANMIKGKTPEEIKKVFGIDRDFTPEEEEEVRKENPWLGEK*

Click here to download the sequence:
Link to NCBI Protein BLAST