Transcript Information: R_Transcript_161127.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0816569454648
Replicate 20.77764075615919
Replicate 30.67871815099711
Condition 2: 8 Hour
Replicate 10.72550710954801
Replicate 20.66254464714624
Replicate 31.3445637496583
Condition 3: 24 Hour
Replicate 10.68023132526531
Replicate 20.6534891523134
Replicate 30.64852458331548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161127.p1 GENE.R_Transcript_161127~~R_Transcript_161127.p1 ORF type:complete len:135 (+),score=19.77,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|2.8e+03 R_Transcript_161127:158-562(+)
ATGACAAAGGATAGAATACAGAAATGGGAGCCTAATTGTGACACAGGATGCTTACTTTGCAAGAGGGGGGAGGAAACATGTGAACATCTTCTTGTCCACTGCAACTTTAGCCAAAAAGTTCTAAGGATTCTGCTGAATTTCTTGAATGTTTCTTGGACTCCAGTTGGAACCTGGGAGTTAACAATTGAAAGGTGGCTGCAGCTAAGCAAAGGGAAGTCTCAGAAAGCGCAGTATGTTAGAGCCATCTTCACAGAAGTGTGCTATGCTGTGTGGTGGGAGCGAAATCAGAGGCATTTTAGACAACAGGAGAAGAGTGCTGAGCAGGTGGCACATACTATTCTGTATATAATCTATGTTAGAGCTCAGAATAGGAGTAAGACTGCTAAATTCCTAACTTGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161127.p1 GENE.R_Transcript_161127~~R_Transcript_161127.p1 ORF type:complete len:135 (+),score=19.77,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|2.8e+03 R_Transcript_161127:158-562(+)
MTKDRIQKWEPNCDTGCLLCKRGEETCEHLLVHCNFSQKVLRILLNFLNVSWTPVGTWELTIERWLQLSKGKSQKAQYVRAIFTEVCYAVWWERNQRHFRQQEKSAEQVAHTILYIIYVRAQNRSKTAKFLTCL*

Click here to download the sequence:
Link to NCBI Protein BLAST