Transcript Information: R_Transcript_161128.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62161786533098
Replicate 20.06500402605665
Replicate 30.4255121534889
Condition 2: 8 Hour
Replicate 10.7580763141562
Replicate 20.48460115445294
Replicate 30.33718162143134
Condition 3: 24 Hour
Replicate 10.92399843331317
Replicate 20.34141267632473
Replicate 30.67763791600301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161128.p1 GENE.R_Transcript_161128~~R_Transcript_161128.p1 ORF type:complete len:323 (+),score=47.60,RVT_1|PF00078.23|5.1e-29 R_Transcript_161128:504-1472(+)
ATGATGAAAGTGGATATACAAAAGGCTTATGATAGTGTGGAATGGGAATTTATAAAGCAAATGATCATAGAATTGGCTTTCCCTGCTATTTTTATCAATTGGGTGATGGGCTGCATTTCTACAGTCTCTTTTTCGATTCTGATCAATGGGGAGCTGACAGACAAATTTGAAGCTCAAAAGGGGCTTAGACAAGGAGATCCCCTCTCTTCTTATCTATTTGTGATAGCCATGGAATATTTGAGTAGATGTCTCAAAGAAATGTGTGATGATCCAAACTTCAATTTTCATCCTAAATGTGGGAGACAAGGTCTAACCCACTTGATATTTGCTGATGATCTCATGCTATTTGCTCAGGGTGATATCATCTCTGTCAAGCTGATGCAGGGAGCTTTTGGTAAATTTTCTAAAGCTTCGGGTCTTCATGCTAATATGGACAAAAGCACCTTCTTCTGTGGTGGACTAATGGAGCAGGATAAGAATAAAATTCTAGAGATGCTGAATATGAAGGAGGGTTGTATGCTGGTTAGATACTTGGGACTCCCTCTCTCTCATAAAAAACTCTCAGTGGTGCAATGTATGGTGATAGTGGATAAAGTGACTGCAAGAATTTCTTCTTGGACAACGAGATTCCTTTCTTATGCTAGGAGGGTACAGCTGGTACAGTCTTTCATTTTTGGTATTCATGCCTTCTGGGCACAAATTATGTTAATTCCTAAGAAGGTGCTAAAAATGGTGGAAGCAATGTGTAGGAGTTTTATATGGACAAGCAAGGCATCCATTTCCAGAAAAGCCTTAGTAGCTTGGGATAAAGTCACGATTCCAAAGAAAAATGGGGGCTTAGGGCTGATGAACTTGATGCTCTGGAATAAGGCAACCATCTGGAAATTGTGTTGGGATTTCTCAATGAAAAAGGATAAGACTTGGATCAAATGGGTCCATGGTTACTACCCTGGTTTAGAGCAATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161128.p1 GENE.R_Transcript_161128~~R_Transcript_161128.p1 ORF type:complete len:323 (+),score=47.60,RVT_1|PF00078.23|5.1e-29 R_Transcript_161128:504-1472(+)
MMKVDIQKAYDSVEWEFIKQMIIELAFPAIFINWVMGCISTVSFSILINGELTDKFEAQKGLRQGDPLSSYLFVIAMEYLSRCLKEMCDDPNFNFHPKCGRQGLTHLIFADDLMLFAQGDIISVKLMQGAFGKFSKASGLHANMDKSTFFCGGLMEQDKNKILEMLNMKEGCMLVRYLGLPLSHKKLSVVQCMVIVDKVTARISSWTTRFLSYARRVQLVQSFIFGIHAFWAQIMLIPKKVLKMVEAMCRSFIWTSKASISRKALVAWDKVTIPKKNGGLGLMNLMLWNKATIWKLCWDFSMKKDKTWIKWVHGYYPGLEQS*

Click here to download the sequence:
Link to NCBI Protein BLAST