Transcript Information: R_Transcript_161128.p4


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0304090861535
Replicate 20.84662501678621
Replicate 30.92365877403841
Condition 2: 8 Hour
Replicate 11.3822665696026
Replicate 21.0819781536058
Replicate 30.43915186984807
Condition 3: 24 Hour
Replicate 10.37028721335007
Replicate 20
Replicate 31.2355962323248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161128.p4 GENE.R_Transcript_161128~~R_Transcript_161128.p4 ORF type:complete len:124 (+),score=14.14,zf-RVT|PF13966.2|1.3e-15 R_Transcript_161128:1564-1935(+)
ATGCTGACTATGGATATTCCAAAGGTGAGGTGGTATAACTTGGTATGGACCAATTTTGTGAGACCAAGAGCAAAATTTATATCTTGGTTGTTACTGTTACAAAAGCTGATGACAAAGGATAGAATACAGAAATGGGAGCCTAATTGTGACACAGGATGCTTACTTTGCAAGAGGGGGGAGGAAACATGTGAACATCTTCTTGTCCACTGCAACTTTAGCCAAAAAGTTCTAAGGATTCTGCTGAATTTCTTGAATGTTTCTTGGACTCCAGTTGGAACCTGGGAGTTAACAATTGAAAGGTGGCTGCAGCTAAGCAAAGGGAAGTCTCAGAAAGCGCAGTGTGTTAGAGCCATCTTCACAGAAGCGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161128.p4 GENE.R_Transcript_161128~~R_Transcript_161128.p4 ORF type:complete len:124 (+),score=14.14,zf-RVT|PF13966.2|1.3e-15 R_Transcript_161128:1564-1935(+)
MLTMDIPKVRWYNLVWTNFVRPRAKFISWLLLLQKLMTKDRIQKWEPNCDTGCLLCKRGEETCEHLLVHCNFSQKVLRILLNFLNVSWTPVGTWELTIERWLQLSKGKSQKAQCVRAIFTEAC*

Click here to download the sequence:
Link to NCBI Protein BLAST