Transcript Information: R_Transcript_161197.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value1.3E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.013777190436
Replicate 26.9987668054327
Replicate 37.4765046320775
Condition 2: 8 Hour
Replicate 16.4615476944119
Replicate 26.211356066996
Replicate 37.4371182402974
Condition 3: 24 Hour
Replicate 18.2903192766709
Replicate 29.3428527244807
Replicate 310.031864648161


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161197.p1 GENE.R_Transcript_161197~~R_Transcript_161197.p1 ORF type:3prime_partial len:144 (+),score=3.28,DUF640|PF04852.8|4.6e-50 R_Transcript_161197:164-592(+)
ATGTCAAGTAGCAGTATAATGATCAAGGGTAATGATATAGAGGATGATCAAGGACTGGGCCCATCGTCAGCTGACAAAGTCGGGGCCCAGTCCCCGATCAACAGGCAGCCGCTGAGCCGGTATGAGTCGCAGAAGCTGCGAGACTGGAACACCTTCAGCCAGTACCTGAAGAATCAGCGGCCGCCTGTAGGGGTGATGTCAGAGTGCACCCCAAGTCACGTGCTGGATTTCCTGCGGTACTTGGATCAGTTTGGTAAGACCAAAGTCCACTTTCAAGGGTGCATGTTTTTCGGGCAGCCGGAGCCGCCCGGACCATGCACCTGCCCGCTAAAACAGGCTTGGGGTAGCCTCGACGCTCTCATAGGCCGCCTTCGGGCGGCCTATGAGGAGAACGGGGGCCCACCCGAGACCAACCCATTTGCTAGTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161197.p1 GENE.R_Transcript_161197~~R_Transcript_161197.p1 ORF type:3prime_partial len:144 (+),score=3.28,DUF640|PF04852.8|4.6e-50 R_Transcript_161197:164-592(+)
MSSSSIMIKGNDIEDDQGLGPSSADKVGAQSPINRQPLSRYESQKLRDWNTFSQYLKNQRPPVGVMSECTPSHVLDFLRYLDQFGKTKVHFQGCMFFGQPEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGPPETNPFASG

Click here to download the sequence:
Link to NCBI Protein BLAST