Transcript Information: R_Transcript_161479.p3


Annotated TAIR IDAT2G38710.1
Annotated Gene NameAMMECR1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16184517-16186764 | Reverse length=214
E-Value8.7E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.784331912385
Replicate 25.7920828734615
Replicate 315.271158397435
Condition 2: 8 Hour
Replicate 112.383655835388
Replicate 28.2246921714706
Replicate 314.39610497479
Condition 3: 24 Hour
Replicate 122.430041544309
Replicate 214.957014649932
Replicate 314.843385937091


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161479.p3 GENE.R_Transcript_161479~~R_Transcript_161479.p3 ORF type:5prime_partial len:87 (+),score=24.01,AMMECR1|PF01871.13|3.3e-10 R_Transcript_161479:1-261(+)
AGAAAAAGGAAGAAAATGGTGTCGGCAAAAAGGGAGATGGCTGTGTACTGCTTTGACACACTTGTAGCTCACTACAATGGCGACCAACCTCCTCCTCCTGCTTTTGAGGAGGGTCACCACCCACTATTTGTTACCTGGAAGAAAGTGGTGTATGGAGGTGACCCTCGTCTCCGTGGCTGCATTGGGACTCTTGAACCCCGTGACATTATCAATGGTTTTAAAGACTATGCTCTTACAAGTGAAAAGGATTCTGATGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161479.p3 GENE.R_Transcript_161479~~R_Transcript_161479.p3 ORF type:5prime_partial len:87 (+),score=24.01,AMMECR1|PF01871.13|3.3e-10 R_Transcript_161479:1-261(+)
RKRKKMVSAKREMAVYCFDTLVAHYNGDQPPPPAFEEGHHPLFVTWKKVVYGGDPRLRGCIGTLEPRDIINGFKDYALTSEKDSDD*

Click here to download the sequence:
Link to NCBI Protein BLAST